Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3445 ATGGCTGGATTCCTCGCAAGGCTGACACATTCGAGAAGATTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCCTAAAGACACATTGACGGGTAAAATTGTTGCTCTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTTTGCGGAGATTGGATCATCCCAATGTTGTAAAGTTGCATGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATCTGGTGTTTGATTACATGGAGCATGATTTAGCTGGACTTGCCGCAAGCCCAGGAATCAGGTTCACAGAGCCTCAGGTCAAATGTTACATGCATCAGCTGCTATCTGGACTTGAGCACTGTCATAACCGTCGTGTGCTTCATCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATTGCAGACTTTGGACTGGCATCTTTGTTTGACCCAAACCATAAGCATCCCATGACTAGTCGTGTAGTAACCCTTTGGTATCGGCCTCCGGAGTTGCTGCTTGGTGCCACTGATTATGATGTGGGTGTAGACCTATGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGCTGGAAAGCCAATTATGCCTGGTCGTACAGAGAGCCATACAAGAGATGCATCAGGAGAGACATTTAAAGATTTTCCACCTTCTGCATTACCCCTTATCGACAGTCTTCTTGCAATTGATCCTGCAGAACGGAGAACTGCCTCAGATGCTTTAAGAAGTGAGTTCTTCATCACAGAGCCTTATGCTTGCGATCCTTCTAGTCTTCCAAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGACGGGATGACGAAGCCAGGAGGCTAAGAGCAGTGAGCAAAGCTCAGGCTAATGGTCCAAAAAAGCATCGTATGCGTGTTCGTGCTGTGAAAGCTATTCCTGCGCCTGAAGCCAATGCAGAGATTCAATCCAATATTGATAGGAGACGCCTAATCACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCACCTCATCAAGATGGACAATTTGGCTTTCCTTTGGGATCTTCACATCATATTGATCCAGATACCGTTCCTACCGATGTCTCTTTCAGCTTCAACCAACTATACTTATTCAAAGGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTAA 1203 0.4356 MAGFLARLTHSRRLIRLGKELIVMCTKPKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLHGLVTSRMSCSLYLVFDYMEHDLAGLAASPGIRFTEPQVKCYMHQLLSGLEHCHNRRVLHRDIKGSNLLIDNEGILKIADFGLASLFDPNHKHPMTSRVVTLWYRPPELLLGATDYDVGVDLWSAGCILGELLAGKPIMPGRTESHTRDASGETFKDFPPSALPLIDSLLAIDPAERRTASDALRSEFFITEPYACDPSSLPKYPPSKEMDAKRRDDEARRLRAVSKAQANGPKKHRMRVRAVKAIPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGQFGFPLGSSHHIDPDTVPTDVSFSFNQLYLFKGTIPSLVRSHW* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3445 400 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3445 400 Gene3D Phosphorylase Kinase; domain 1 27 93 - -
Dod01g3445 400 SMART serkin_6 11 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3445 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Dod01g3445 400 PANTHER OS01G0367700 PROTEIN 225 386 - -
Dod01g3445 400 PANTHER OS01G0367700 PROTEIN 25 218 - -
Dod01g3445 400 Pfam Protein kinase domain 27 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3445 400 PANTHER CELL DIVISION PROTEIN KINASE 225 386 - -
Dod01g3445 400 PANTHER CELL DIVISION PROTEIN KINASE 25 218 - -
Dod01g3445 400 Gene3D Transferase(Phosphotransferase) domain 1 94 301 - -
Dod01g3445 400 SUPERFAMILY Protein kinase-like (PK-like) 26 268 IPR011009 -
Dod01g3445 400 MobiDBLite consensus disorder prediction 343 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3445 Dod-Chr1 75653016 75656670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3445 13 302 Core Cell Cycle Gene Families AT5G10270 44.543 5.37e-90 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod01g3445 Pkinase 3.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3445 K08819 - gmx:100786837 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3445 01 75653016 75656670 Dod01g3445 01 75653016 75656670 ECH
Dod01g3445 01 75653016 75656670 Dod06g1711 06 23464211 23469101 PCT