Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3442 ATGGCCACTGATCCTAAAACCAATCAACTTTTGTATTATGAGGAGAGGGCAGACCATTCAAAAGGAATTTTACATCTTGACAAGTCATTGCTTGCTGACAACCCTTCCCTCTCTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCACCTGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTACGGCGTCATTTTGTCAAGGGATTGCTTCTTGATGATATAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCAAACTATGCTGCAAGGATTGATAATTTCCGAAGCTATGACACTGTTAGCAGGGATATAATTCATAGATGGACATATCCATTCGTGCCAGATGTTATGAATTATGGCAATACAGCTCCTAAACATGAACGACAAGGAATGTATCGTGCTTCAGAAATATCGCAATCACAAACTGCCATTATTGGCCCATTCACTGTTATAGGATTTGGCACCAAAATTGGAGATAACACTAAAATTTCAAATTCCGTTATTGGAGGAGGATGTAAAATTGGGTCAGATGTTCACATAGAGGGATGCTACATATGGGACAACGTCAGCATAGAAGATGGCTGTAAACTCAGGCATGCAATTGTGTGTGATGGGGTGACTATGATGTCAGGAGCTGTTCTGGAACCTGGTGTTATTTTGTCTTTCAAGGTTATAGTTGGGCAGGAGTTTGTTGTTCCTCCTTATTCATATGTATCTCTATTACAGCAACCAGTTGAGGAAGATAGTGATGAAGAGCTTGAATATGCTGATAGTACTAGTGCCATCACAAGCAAAGTGGATAAGTCGGATCAAGAGATTGCATCCCAAGTATTGGAGACACAATTTAGCTCTGCTTCGGAGGATGGCAGTATTCTCCCACCCTCTGGAGAGCTGAAACCTGATTCCGATGAGGATGATAATGAAGATGCTAGAGATGAATTTTATTACTTTGAGAAAGAGGTTGAAGCAACTTTTCTCCGGGCTGTGCATGAAAACATAAAAGAGGATCATTTGATCTTAGAAGTTAACTCTTTGAAGTTGTCATGTAATAAGCTAACTGCTGATTGTGCGGGAGCTGTATTTTATGCTATGATGAAGTATGCTTTAGACACCCCGCATAGTTCAGCTGATAGCTTGATTCACAATGTTCAGGTTGTACTTACAAAATGGAAAAAGGCTCTTACATCCTATCTGACTGACATAGATGAACAGATTGAAATCATACTAAAATTTGAAGAAATGTGTTTGGAATCTGCCAAGGAGTTTGCTCCATTGTTCACAAGGATTTTGCACTACATGTATAACGAAGATATTGTAGAAGAAGATGCTATTTTAAGTTGGGAAGATGAGAAGAGATATGCAGAAGAGGCAGATAAAGGTTTTGTTAAGCAGGCTCAAAAATTAATTCAAACCGAACAAACAAACGGAGCAGAAACTACCGGGCTTGCCATTAAACAACGCATCAACACTGGCTCTCTTGGAACCCATTCGTACATGGACGATCAGAAGCCAGGGCCGGGGGCCCCAGGAGGAGGTCCACCAAACAGTGGCCCACAGCAACTCTCTAGGAGACAGCAGCAGCAGAGACAATACAAACTGCCAACAAATAAGATGTGGTACCGACAATTAAGGATTAGCATAAGTGATGATTAG 1677 0.4073 MATDPKTNQLLYYEERADHSKGILHLDKSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSNYAARIDNFRSYDTVSRDIIHRWTYPFVPDVMNYGNTAPKHERQGMYRASEISQSQTAIIGPFTVIGFGTKIGDNTKISNSVIGGGCKIGSDVHIEGCYIWDNVSIEDGCKLRHAIVCDGVTMMSGAVLEPGVILSFKVIVGQEFVVPPYSYVSLLQQPVEEDSDEELEYADSTSAITSKVDKSDQEIASQVLETQFSSASEDGSILPPSGELKPDSDEDDNEDARDEFYYFEKEVEATFLRAVHENIKEDHLILEVNSLKLSCNKLTADCAGAVFYAMMKYALDTPHSSADSLIHNVQVVLTKWKKALTSYLTDIDEQIEIILKFEEMCLESAKEFAPLFTRILHYMYNEDIVEEDAILSWEDEKRYAEEADKGFVKQAQKLIQTEQTNGAETTGLAIKQRINTGSLGTHSYMDDQKPGPGAPGGGPPNSGPQQLSRRQQQQRQYKLPTNKMWYRQLRISISDD* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3442 558 PANTHER - 1 275 - -
Dod01g3442 558 Gene3D Hexapeptide repeat proteins 136 275 - -
Dod01g3442 558 PANTHER - 307 480 - -
Dod01g3442 558 Pfam eIF4-gamma/eIF5/eIF2-epsilon 411 478 IPR003307 GO:0005515
Dod01g3442 558 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 307 480 - -
Dod01g3442 558 MobiDBLite consensus disorder prediction 289 316 - -
Dod01g3442 558 MobiDBLite consensus disorder prediction 523 543 - -
Dod01g3442 558 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 1 275 - -
Dod01g3442 558 SUPERFAMILY ARM repeat 325 478 IPR016024 -
Dod01g3442 558 Gene3D - 312 483 - -
Dod01g3442 558 SMART 542_3 399 486 IPR003307 GO:0005515
Dod01g3442 558 CDD LbH_eIF2B_epsilon 158 236 - -
Dod01g3442 558 CDD W2_eIF2B_epsilon 320 478 IPR044123 GO:0005085|GO:0031369
Dod01g3442 558 SUPERFAMILY Trimeric LpxA-like enzymes 84 245 IPR011004 -
Dod01g3442 558 MobiDBLite consensus disorder prediction 501 543 - -
Dod01g3442 558 ProSiteProfiles W2 domain profile. 312 490 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3442 Dod-Chr1 75621141 75630106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3442 1 478 Eukaryotic Initiation Factors Gene Family AT2G34970 57.225 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3442 K03240 - gmx:100784894 797.349