Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3441 ATGGGGGCACCGAAGAAGAGCGGGGGCAGGGTTTCAGAGGATTCGGATGAATTGGTTCGGGTTCCATTGCAGGCCATCCTCTTAGCTGATAGCTTCACCACCAAGTTCAGGCCTATCACCCTCGAACGCCCCAAAGTGCTGTTGCCACTGGTTAATGTTCCGATGATAAATTACACGTTGACGTGGCTCGAATCCGCTGGCGTCGAAGAGGTTTTTGTTTTCTGTTGTGCTCATTCCAAGCAGGTCATTAACTATTTGGATAAATCTGGCTGGCTCTCTCAACCTAATTTCGCCGTAACAACCATCGAGTCTCATAATTCTGTTAGCGCAGGAGACGCCCTGCGCCTAATATACGAACGCAATGTGATACATGGAGACTTTGTCCTTATTAGTGGGGATACCGTAAGCAACATGTCGCTTACTCGGGCACTTCAAGAGCATAAAGAAAGGAGGAAGAAAGATAGTAACGCTGTGATGACCATGGTCATTAAACGGTCAAAACCTAATCCGGCTATCCATCAGTCTCGGACTCGGTACTGA 540 0.4815 MGAPKKSGGRVSEDSDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCAHSKQVINYLDKSGWLSQPNFAVTTIESHNSVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTRALQEHKERRKKDSNAVMTMVIKRSKPNPAIHQSRTRY* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3441 179 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 176 IPR029044 -
Dod01g3441 179 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 171 IPR029044 -
Dod01g3441 179 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 177 - -
Dod01g3441 179 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Dod01g3441 179 CDD eIF-2B_epsilon_N 23 179 IPR035543 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3441 Dod-Chr1 75620253 75621130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3441 1 176 Eukaryotic Initiation Factors Gene Family AT2G34970 69.780 9.03e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3441 K03240 - gmx:100784894 323.553