Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3440 ATGGCCGGTGAATTAAGCTTACTATTCCCAAGATTGCAAATATTATCCACTTCTGATCATGCATCCGTTGTCTCCATGAACCTATTTGTAGCACTTTTGTGTGCTTGTATCGTCATTGGACATCTTCTTGAAGAGCATCGGTGGATGGATGAGTCTATCACTGCCCTTGTGATAGGACTTTGCACTGGCGTATTCATTCTGTTGTTAAGCGGTGGTAAAAGCTCGCATCTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATATCTTCTGCCACCTATCATACTCAATGCCGGGTTTGAAGTGAAAAAGAAGCAATTTTTTGTCAGCTTCATCACCATCATGCTGTTTGATGCTGTTGGCACATTAATAAGTTGTTCCATCATAACTTATGGTATGATGGGCATCGGCTCACTGGATATGGGGGATTATATAGCAATTGGTGCGATATTTGCTGCGACAGATTCTGTGTGCACGTTGCAGGTGCTAAAGCAGGATCAGACACCTTTACTGTACAGTCTTGTATTTGGGGAAGGTGTAGTGAATGATGCTACATCAGTGGTGCTTTTCCATGCAATCCAAAGTTTTAATCTCGACCATATTGATCCAACAATTGGGTTACATTTGTTTGGCAACTTCTTGTATCTATTCACCACAAGCACTTTGCTCGGGATTGTGGCTGGTCTACTCAGCGCTTACGTTATTAAAAAGCTATATATTGGCAGGCACTCTACAGATCGTGAGGTTGCGCTGATGATGCTAATGGCATACCTTTCCTACATGCTTGCTGAATTATGCTTTCTGAGTGGCATTCTCACCGTATTCTTTTGTGGGATTGTTATGTCTCATGGTACTTGGCATGATGTGACCGATGGCTCAAGAATCACTACCAAACATGCTTTTGCAACCTTGTCGTTGCTTGCTGAGACCTTTATCTTCCTTTATGTTGGCATGGATGCCTTGGACATTGACAGATGTAGGTTTGTTAGCGACAGGATACGTAATATGCTTGGAACTTCAGTTGCTGTGAATTCAGTATTATTGGGTCTAGTACTTGCAGCAAGAGCAGCTTTCGTTTTCCCATTATCATGCTTGTCCAATCTGACTAAAAAGTCGTCGAGTCAGAAAATAAGCTTCAGGCAGCAGGTGATCATTTGGTGGGCTGGTCTCATGAGAGGTTCTGTTTCAATGGCACTTGCTTATTATCAGGTGGGAACAACACTGCTCATTAGTTGA 1233 0.4217 MAGELSLLFPRLQILSTSDHASVVSMNLFVALLCACIVIGHLLEEHRWMDESITALVIGLCTGVFILLLSGGKSSHLLVFSEDLFFIYLLPPIILNAGFEVKKKQFFVSFITIMLFDAVGTLISCSIITYGMMGIGSLDMGDYIAIGAIFAATDSVCTLQVLKQDQTPLLYSLVFGEGVVNDATSVVLFHAIQSFNLDHIDPTIGLHLFGNFLYLFTTSTLLGIVAGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELCFLSGILTVFFCGIVMSHGTWHDVTDGSRITTKHAFATLSLLAETFIFLYVGMDALDIDRCRFVSDRIRNMLGTSVAVNSVLLGLVLAARAAFVFPLSCLSNLTKKSSSQKISFRQQVIIWWAGLMRGSVSMALAYYQVGTTLLIS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3440 410 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod01g3440 410 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod01g3440 410 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod01g3440 410 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod01g3440 410 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 403 - -
Dod01g3440 410 PANTHER SODIUM/HYDROGEN EXCHANGER 7 403 IPR018422 GO:0006812|GO:0015299|GO:0016021
Dod01g3440 410 Gene3D - 139 190 - -
Dod01g3440 410 Pfam Sodium/hydrogen exchanger family 30 400 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3440 Dod-Chr1 75605328 75610992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3440 15 402 Antiporters AT3G05030 76.142 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3440 - - gmx:100789667 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3440 01 75605328 75610992 Dod01g3440 01 75605328 75610992 ECH
Dod01g3440 01 75605328 75610992 Dod06g1712 06 23486152 23492513 PCT