Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3399 ATGGAACTTAACACTACCGCTGTACCTGCACTGCCACCAACCGCTCCTACCAAGAACCAAACTCGGCAAGGCCAACACTCACATTCTCAAAGCCATAAGTTCCACAGCCAACAACAACACCATGCAAATTTCCCATCCAAAATCATTCTCATAACCATCACTGCGCTCGCCTCACTTACGGTCTTACTTGCCATCTTTCTGGTTGTATTCATGCTCCGCCGTCTAAAATCAACCACCAAGAACAGAACATGCAAAGATAACAGCAAAGTAGCACTTCACGACACAGGTTTCGGTTCCAATGCTTCAACAGCGTTGAGCTTAAATTCTAGCCCAGATGTAAAGGGAGGGTGTCTTCATGGAGGAAATCAGAACATGACACTGGCAGCAGCACCTAGATTTAGAGTAGTCCAAGTGTTGACATATAAGGAGATAGAAGTAGCCACGGGTGGATTCAGTGATGCAAATGTGATTGGTAATGGCAACTTTGGTTTGATGTATAGAGGAATCCTGAGTGATGGCACTTTGGCTGCAATTAAACTGATGCGCAGGGAAGGTAAGCAAGGGGAGCGTGCCTTCAGAATAGAGGTGGATCTCTTGAGCCGTTTGCAGTCTCCTTATTTGGTGGAGTTGCTAGGCTATTGTGCGGACCAACACCACAGGGTGTTGATATTTGAATACATGCCTAATGGCACACTCCATCACCATCTCCACTCTCCTAATAACAGCCAAAGTCAACCGTTGGATTGGTGGACCCGGATGAGGATAGCCCTTGATTGTGCCAAGGCTCTAGAGTTCCTGCACGAACATGCTGTCTCTCCTGTGATCCACCGTGACTTCAAGTGTAGCAATGTTCTATTGGATCAGAACTTTCGTGCCAAGGTGTCAGATTTTGGATTGGCTAGGACGGGATCGGGCAAAGTCAACGGTCAAATCTCCACCCGCGTGTTAGGGACCACAGGATATGTGGCACCAGAGTATGCCTCGACAGGCAAGCTTACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAGCTATTAACAGGACGTGTACCGGTTGATATTAAGCGGCCCCCTGGAGAACATGTCCTTGTCCCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAAGTGGTGGAAATGGTTGACCCAGCTCTACGAGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCAATTGCAGCAATGTGCATACAACCAGAAGCTGATTACAGACCTTTAATGACAGATGTTGTACAATCACTAATACCACTTGTTAGGAACCCGGCCGTATTCTATTAG 1311 0.4668 MELNTTAVPALPPTAPTKNQTRQGQHSHSQSHKFHSQQQHHANFPSKIILITITALASLTVLLAIFLVVFMLRRLKSTTKNRTCKDNSKVALHDTGFGSNASTALSLNSSPDVKGGCLHGGNQNMTLAAAPRFRVVQVLTYKEIEVATGGFSDANVIGNGNFGLMYRGILSDGTLAAIKLMRREGKQGERAFRIEVDLLSRLQSPYLVELLGYCADQHHRVLIFEYMPNGTLHHHLHSPNNSQSQPLDWWTRMRIALDCAKALEFLHEHAVSPVIHRDFKCSNVLLDQNFRAKVSDFGLARTGSGKVNGQISTRVLGTTGYVAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVPWALPRLTNREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPAVFY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3399 436 CDD STKc_IRAK 157 428 - -
Dod01g3399 436 PANTHER OS01G0750732 PROTEIN 3 431 - -
Dod01g3399 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Dod01g3399 436 ProSiteProfiles Protein kinase domain profile. 151 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3399 436 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 3 431 - -
Dod01g3399 436 Gene3D Transferase(Phosphotransferase) domain 1 227 432 - -
Dod01g3399 436 Pfam Protein tyrosine and serine/threonine kinase 155 425 IPR001245 GO:0004672|GO:0006468
Dod01g3399 436 MobiDBLite consensus disorder prediction 1 38 - -
Dod01g3399 436 SUPERFAMILY Protein kinase-like (PK-like) 134 425 IPR011009 -
Dod01g3399 436 Gene3D Phosphorylase Kinase; domain 1 121 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3399 Dod-Chr1 75155425 75158746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3399 136 431 Receptor kinase-like Gene Family AT3G58690 68.121 4.14e-153 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dod01g3399 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3399 - - mtr:MTR_1g082580 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3399 01 75155425 75158746 Dod01g3399 01 75155425 75158746 ECH