Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3376 ATGCAAGACATATTCGGATCAGTTCGGCGATCACTGGTATTCCGTGCTTCGCCGGAGAACGAAGAGCAGCAGAACTCACTCGGAGGAACCCTAGTTGATAAGATCAGTTGTTGCATACGCAATTCCAGAGTCTTCTCTAAGCCCTTGCCCTCTCCTTCGCCGATCCCCAAGGAGCCTACGATCCGATGGCGCAAGGGCGAGTTGATCGGTTGCGGTGCATTTGGCCAAGTTTACGTCGGGATGAATCTCGATTCTGGAGAGCTTCTGGCAGTTAAACAGGTTTTGATTGCGGCAAGTAGTGCTTCCAAGGAGAAGGCACAGGCTCACATAAAAGAACTCGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCGCATCCCAACATTGTTAGGTATTTGGGTACAGTTAGAGAGGAGGACACCTTAAATATTCTCCTGGAGTTTGTCCCTGGTGGATCCATATCATCACTATTGGGGAAGTTTGGTGCTTTCCCTGAGGCTGTCATAAGAACTTACACGAAGCAGATACTGGTTGGACTTGAGTACTTGCATAAAAACGGAATCATGCACAGAGACATTAAGGGCGCTAATATTCTTGTAGATAATAAAGGCTGCATAAAACTTGCAGATTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCTACGATTTCTGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGGTTATTCTTCAGACTGGACATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACTGTGATCGAGATGGCCACTGGAAAGCCTCCGTGGAGTCAGCAATACCAGCAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCCCATCCACCAATCCCTGATCATCTCTCAAGTGGAGCAAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAGCCATTTTTGAGGCCGTCAGCATCAGAACTGCTACAGCATCCCTTTGTTACTGGCGAACCTATGGATTCTCTTCCTCTGTCATCTACTGCCATGGAAAATTTTGAACCTTCTTCATCGTCATGTGCCCCAAATGTTGAATCCTACCTTCAGTGCTCAACTGTAAATCCTGAGGACTCTGGAAATAAACAGTTTTGGGGAATTAGCAATGATGATGACATGTGTGAGATTGATGACAAAGATGAGTTCTCTCAGAGTGATGTCAAAAGCAAATCATTGATGTCAGAAAATATTGAGAGTTTCAATCCGATGTCTGATCCCTCTGATGATTGGGGGTGTAAATTTGATGCAAGTCCGGAGTTGGAACATAAAGGTGCCAGTTTTGGCACTAATGAAAGTTACATGTCGCCTGGTCACTCGGGGGCTAATAATAATTCGGGCCAGAAAGATTTTTCGTTTCCATGCGTGCCATCTCTGTCAGAGGAAGATGACGAGCTCACAGAGTCAAAGATTCAAGCCTTTTTGGATGAGAAGGCTCTTGAACTGAAGAAACTGCAGACACCTTTATATGAAGAGTTCTACAACAGTTTAAATACATCTTGTTCTCCAAATGTGATTGATGGCACAAGTGATGAAACTGCTTCCCGAAAATACTTGAAATTGCCTCCTAAAAGTAGGTCCCCAAGTCGGGCACCAATTAACACTCCATCTAAAGCAGTTGACAACACTGGAAGTCCAGGAAGCAATGGCAGATCCTCGTCAAATGTTGGCAATGTAAATGATCATGGTTCACAGGACATTCCAGCATCTCCCCGTAACGAATGGAAAGGAGTGGCTGACTCCCAGCAGGAACCCAGTAGCCCAAGTTTAAGCTTTTCTGAGAGGCAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAGCGAGAAATGATGCGCCAAGCTGGGGTGGGGGGAAAGACATCTTCACCAAAGGATCGAGCTTTGCATCGGCAGAGAGAGCGGACAAGATTTGCTTCTCCCAGCAAATAA 1965 0.458 MQDIFGSVRRSLVFRASPENEEQQNSLGGTLVDKISCCIRNSRVFSKPLPSPSPIPKEPTIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQILVGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSSGAKDFLLKCLQKEPFLRPSASELLQHPFVTGEPMDSLPLSSTAMENFEPSSSSCAPNVESYLQCSTVNPEDSGNKQFWGISNDDDMCEIDDKDEFSQSDVKSKSLMSENIESFNPMSDPSDDWGCKFDASPELEHKGASFGTNESYMSPGHSGANNNSGQKDFSFPCVPSLSEEDDELTESKIQAFLDEKALELKKLQTPLYEEFYNSLNTSCSPNVIDGTSDETASRKYLKLPPKSRSPSRAPINTPSKAVDNTGSPGSNGRSSSNVGNVNDHGSQDIPASPRNEWKGVADSQQEPSSPSLSFSERQRKWKEELDQELERKREMMRQAGVGGKTSSPKDRALHRQRERTRFASPSK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3376 654 MobiDBLite consensus disorder prediction 431 476 - -
Dod01g3376 654 CDD STKc_MAPKKK 62 326 - -
Dod01g3376 654 SUPERFAMILY Protein kinase-like (PK-like) 62 357 IPR011009 -
Dod01g3376 654 MobiDBLite consensus disorder prediction 635 654 - -
Dod01g3376 654 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 614 - -
Dod01g3376 654 MobiDBLite consensus disorder prediction 507 654 - -
Dod01g3376 654 MobiDBLite consensus disorder prediction 585 602 - -
Dod01g3376 654 Coils Coil 605 625 - -
Dod01g3376 654 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Dod01g3376 654 Pfam Protein kinase domain 64 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3376 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Dod01g3376 654 SMART serkin_6 63 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3376 654 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 614 - -
Dod01g3376 654 Coils Coil 96 123 - -
Dod01g3376 654 MobiDBLite consensus disorder prediction 438 462 - -
Dod01g3376 654 MobiDBLite consensus disorder prediction 603 625 - -
Dod01g3376 654 MobiDBLite consensus disorder prediction 537 576 - -
Dod01g3376 654 Gene3D Transferase(Phosphotransferase) domain 1 62 358 - -
Dod01g3376 654 ProSiteProfiles Protein kinase domain profile. 63 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3376 Dod-Chr1 75051803 75057235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3376 1 654 MAP Kinase Kinase Kinase AT1G54960 58.166 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod01g3376 Pkinase 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3376 K20606 - gmx:100807537 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3376 01 75051803 75057235 Dod01g3376 01 75051803 75057235 ECH