Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3359 ATGGGTCGTGGTTATGAGGTTCTCAGCATGACACTCACCATCACCTTATTGTTCCTCCTATCATTGCAAGGAACTCACATTTTAACTGTGGGTGCTTTGCTGAATCCCGCAGGAGAGAATCCACAAGAGAATGAAGAGCATGTTAAGAAAATCTCAGGAATTGATGAGATTGAAGAGAAGCAAGGTTTCATAGTGGAAAAGTTTAGAGCCTTGCTTGGCCTAATGAGTTTCCACTCTGAGTTTGTGTCCCCAGCACCTTCTCCTTCACCCAACATTGAAGCTGAGGCTCCGGCTCCGGCTCCGGCTCCTTCTCCGCTTCTGCACCTCCACCCCCATTCCCATCATCCAAGACACCACTCTCATTGGAACTATCCACTTCACAAAACTCAACATGAAGATGCAAGCAAAGCAAAGAGGACTCTAGTTGCTGTTGTTGTCTCTGTGGGAGTTGCTACCTTAATTTGTGCACTTGGGTGTGTCTTGGTCTGCATGAGATTCAGAAATTGGAAAAAGACACCCAAAAGGACAATGCCAGTCTTCAGCAACAGCAGATCAGGAACAGGAGGTACTTATCATAATTCATCAAGCAACTTGAGTTTAAACTCTTGCCCGGATTTGTTTTATCTCAGTTGTTTGAGCGAAGTTATAGATCAACACGCTTGTGATACCACTTCAAGTCATAATACCACAAATTGTACAATTTATGAGAAGAAAGAGGGACATGGAGAACAAGAATTGATTAGTTCAGGATATGACAATGCTAGCAGTTCTTCCACGAAGGATATTATCTCAGTTCACGAGGATGTGGAAACATTGGTGAGATTTGAATCTGAATATGATGGCGACAACTCTTCCTCTGGCGATAGAATTGTCCCTGAAGAATGCCATTCATCAGATGATGAGAGTTTCCATTCCTTTGAGGATTCACAGTCATCAAAGTCCATCTCCCCTCGAAATTCAATTTCATTAACAATTAAGTGTCTTGGCTCTCACCAGAATTCAAGTCCAAAGGTGAAATCACCATGCAGTCCAAAACAGCTAGAGCAAGAGACTGAAACTTGTGTCCAAAGGAATTCAGATACTTTCTTAGTATCAAGTGCAAATCATAGTAAAAAAAATGAGTTAACTTCTCCACCTCAACCTAGCCCTGCAAAGTTACCATCCAACATTCCTCCACCTCCACCACCATGCCCACCTCCATTTTTGAAAGGGAATAGTAACAGTTTCAAAGCCCCACCTCCTCCACCATCTCAACCTCCTCAATATACACAGCTAGGTAAGGACGGAGCCCCCTTGCCCAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCCTCTGATCGAACAATGGTTTGGGATAAGATACGAACAAGTTCATTTGAGTTGGATGAGGGGATGATCGAGTCACTTTTTGGGTACAATTTGCAAAATTCAATGAAGAATGTCGACGAAACGAAGAGCAAAAGCCCGTCTCCAACCAAACATGTACTTGAGACAAAGCGGCTGCAGAACATAACAATACTTTCAAAAGCTCTGAATATGACCACTGAGCAAGTATGCCAAGCACTAATACTTGGGAAGGGCTTGACTTTGCAACAACTAGAGGCACTGGTGAAAATGGTACCCACCAAGGAAGAAGAAGCTAAGCTGTCAAGTTATGAAGGAGAGATCAATGAATTGGGGTCCGCGGAAAAGTTTGTGCGATCATTGCTTAAAGTACCATTTGCATTTCAACGACTTGAAGCCATGCTTTACAGAGAGACTTTTGAAGACGAAATCATCCACCTCAGCAACTCTTTCTCAATGCTAGAGGAAGCGTGCAAGGAACTAAGGTCAAGCAGGATCTTCTTGAAACTTCTGGAAGCTGTGCTCAAAACAGGAAACCGCATGAACGTTGGGACAATCAGAGGAGGCGCCACTGCATTTAAGCTTGATGCACTTCTCAAGCTTGCAGATGTTAAGGCAACAGATGGTAAAACTACCTTGCTCCATTTCTTTGTTCAGGAGATTGTTCGTTCAGAAGGAATGAGAGTTTCAAATAGCATTATGGGGAAAATTGGCCAGAAAAACAAAAACAGAACCAAGGAAGAGAAAGAAGAGGATTATAGAAGAATGGGACTAGAAGTGGTTTCTGGTCTGAGCAATGAACTACACAATGTAAAGAAGACAGCTACAGTTGACTTGGATGTTCTTGCAAACTCGGTGTCGAACCTGTCAGATGGGATGGCGAAGATGCGGCACCTAGTGAACGAGTTGCATGGGGATGAAAAAAGTGATGATGAGATCTTTGTTAGTTCTATGAAGTTGTTCCTTAATTATGGAGAAGGAAAGCTGAAGGAGTTACGAGGTGATAAAGATAGAGTCCTAGGTCGTGTGAAAGAAATAACGGAGTATTTTCATGGGGATGTGAGCAAAGAAGAATCGAACCCACTTCGAATCTTTGTGATTGTGAGAGACTTTCTGGGCATGTTAGATAATGTGTGTAAAGAGCTTAGAAGGTCTAATGCTCCTCGCTGCCGAAACCCTCTTGCTCCTTTCAGATAG 2547 0.4307 MGRGYEVLSMTLTITLLFLLSLQGTHILTVGALLNPAGENPQENEEHVKKISGIDEIEEKQGFIVEKFRALLGLMSFHSEFVSPAPSPSPNIEAEAPAPAPAPSPLLHLHPHSHHPRHHSHWNYPLHKTQHEDASKAKRTLVAVVVSVGVATLICALGCVLVCMRFRNWKKTPKRTMPVFSNSRSGTGGTYHNSSSNLSLNSCPDLFYLSCLSEVIDQHACDTTSSHNTTNCTIYEKKEGHGEQELISSGYDNASSSSTKDIISVHEDVETLVRFESEYDGDNSSSGDRIVPEECHSSDDESFHSFEDSQSSKSISPRNSISLTIKCLGSHQNSSPKVKSPCSPKQLEQETETCVQRNSDTFLVSSANHSKKNELTSPPQPSPAKLPSNIPPPPPPCPPPFLKGNSNSFKAPPPPPSQPPQYTQLGKDGAPLPKLKPLHWDKVRAASDRTMVWDKIRTSSFELDEGMIESLFGYNLQNSMKNVDETKSKSPSPTKHVLETKRLQNITILSKALNMTTEQVCQALILGKGLTLQQLEALVKMVPTKEEEAKLSSYEGEINELGSAEKFVRSLLKVPFAFQRLEAMLYRETFEDEIIHLSNSFSMLEEACKELRSSRIFLKLLEAVLKTGNRMNVGTIRGGATAFKLDALLKLADVKATDGKTTLLHFFVQEIVRSEGMRVSNSIMGKIGQKNKNRTKEEKEEDYRRMGLEVVSGLSNELHNVKKTATVDLDVLANSVSNLSDGMAKMRHLVNELHGDEKSDDEIFVSSMKLFLNYGEGKLKELRGDKDRVLGRVKEITEYFHGDVSKEESNPLRIFVIVRDFLGMLDNVCKELRRSNAPRCRNPLAPFR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3359 848 MobiDBLite consensus disorder prediction 380 402 - -
Dod01g3359 848 ProSiteProfiles Formin homology-2 (FH2) domain profile. 425 848 IPR015425 -
Dod01g3359 848 PANTHER FORMIN-LIKE PROTEIN 45 848 - -
Dod01g3359 848 MobiDBLite consensus disorder prediction 368 435 - -
Dod01g3359 848 PANTHER FORMIN-RELATED 45 848 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod01g3359 848 MobiDBLite consensus disorder prediction 276 317 - -
Dod01g3359 848 Pfam Formin Homology 2 Domain 429 825 IPR015425 -
Dod01g3359 848 MobiDBLite consensus disorder prediction 86 119 - -
Dod01g3359 848 SMART it6_source 425 840 IPR015425 -
Dod01g3359 848 MobiDBLite consensus disorder prediction 90 106 - -
Dod01g3359 848 Gene3D Formin, FH2 domain 446 841 IPR042201 -
Dod01g3359 848 MobiDBLite consensus disorder prediction 276 307 - -
Dod01g3359 848 SUPERFAMILY Formin homology 2 domain (FH2 domain) 391 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3359 Dod-Chr1 74875356 74878579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3359 39 848 FH2 protein (formin) Gene Family AT3G05470 47.895 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3359 - - gmx:100793761 872.463