Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3344 ATGAGCCGAGGGGGTGCAGCAGGAGCCAAGGGAAAGAAGAAGGGCGTGACCTTCACCATTGACTGTGCAAAGCCAGTGGAGGATAAGATCATGGACATTGCCTCTCTGGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGTGGCAAAGCTGGTGCTCTTGGTGATTCGGTCACTGTTACCCGTGACAAGAGCAAGATCACTGTCACCTCTGACAGCAACTTCTCCAAGCGGTACTTGAAGTATTTGACAAAGAAGTATTTGAAGAAACACAATGTACGTGACTGGCTTAGAGTGATTGCCTCTAACAAAGATAGGACTGTTTATGAACTGAGGTACTTCAACATTGCTGAGAATGAGGGAGAGGAAGAAGATTAA 375 0.464 MSRGGAAGAKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRTVYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3344 124 Gene3D - 6 124 IPR038526 -
Dod01g3344 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Dod01g3344 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Dod01g3344 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3344 Dod-Chr1 74740797 74742345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3344 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.516 1.06e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3344 K02891 - nnu:104598935 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3344 01 74740797 74742345 Dod01g3344 01 74740797 74742345 ECH