Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3342 ATGATGATGATGACGATGGAGGGAATGATGGAGAAGGGGGTGGTGGATGACGTGATAAGGAGGCTGCTGGAAGGGAAAGGAGGGAAGCAGGTGCAGCTGTCCGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCCGGCAAATCTTCCTCTCTCAGCCAATCCTCCTCGACCTTGCTCCTCCCATCCGCATCTGCGGTGATATACATGGTCAGTACCAAGACTTATTGAGGCTATTTGAATATGGTGGCTATCCTCCTGCGGCGAACTACTTGTTTCTAGGGGATTATGTAGACAGAGGGAAGCAAAGTTTGGAGACTATGTGTCTGCTTTTGGCCTACAAAATAAGATATCCCGACAAAATTCATCTCTTGAGAGGGAACCATGAAGATGCAAAGATAAACCGGATATATGGTTTTTACGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACCGACTGCTTTAATTGTTTGCCAGTAGCTGCACTCATTGATGGCAAGATACTTTGTATGCATGGAGGACTCTCTCCGGAATTACAAACTTTGGATCAGATAAAGGAGATTACGAGGCCCACTGAGATTCCAGATAGTGGTCTACTATGTGATCTGCTTTGGTCTGATCCCGATTCTAGCGTTGAGGGTTGGGCAGAGAGTGACAGAGGTGTTTCATGCACTTTCGGACCTAATGCACTAGCAGAATTTTTGGATAAAAATGACCTTGATCTCGTTTGCAGAGGGCATCAGGTTGTGGAGGATGGATATGAATTTTTCGCTAAACGAAGACTAGTCACAATATTTTCTGCTCCAAATTATGGCGGGGAGTTTGACAATGCTGGAGCATTGTTGAGCGTTGATGAATCTCTTGTATGTTCCTTTGAGATATTGAAACCAGTTGATAGAGGATCAGGAAGTGGTTCATCAAAGATGAATCTTAAAAAGCCCCCGAAACTTGGGAAGGTTTAG 975 0.4482 MMMMTMEGMMEKGVVDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLAPPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETMCLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQTLDQIKEITRPTEIPDSGLLCDLLWSDPDSSVEGWAESDRGVSCTFGPNALAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPVDRGSGSGSSKMNLKKPPKLGKV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3342 324 MobiDBLite consensus disorder prediction 304 324 - -
Dod01g3342 324 SMART pp2a_7 33 303 IPR006186 GO:0016787
Dod01g3342 324 Gene3D - 8 307 IPR029052 -
Dod01g3342 324 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 314 - -
Dod01g3342 324 SUPERFAMILY Metallo-dependent phosphatases 28 303 IPR029052 -
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Dod01g3342 324 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Dod01g3342 324 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 314 - -
Dod01g3342 324 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
Dod01g3342 324 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Dod01g3342 324 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Dod01g3342 324 CDD MPP_PP1_PPKL 14 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3342 Dod-Chr1 74712440 74716167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3342 56 247 Calmodulin-binding Proteins AT5G63870 33.480 1.44e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3342 K06269 - gmx:100805030 619.772