Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3337 ATGGCATTGCTCAACTTCCTTTTCATCCTCATGCTTTTACCCACATTTGATGCTCTCTCAGGTGAAATCCCCACGGGAATCGAAACCCAAGACCTGAATGCCTTGATTGCACAAGCCTGCATGAACATCGAAAACCAAAACTCATGCCTCACCAACATCCAAAACGAGCTCGTCAAAATTGGCCCCCCAAGTCCAACTTCAGTGCTGAGTGCCGCACTCGGTGCCACACTCAACGAAGCAAGAGGTGCCATTGACAAGATCACAAAGTTCACCACATTCTCGGTGAGTTACAGGGAGCAACAAGCCATAGAAGATTGCAAGGAGCTTCTAGACTTCTCGGTGTCCGAGCTGGCTTGGTCCATGGGGGAAATGAGGAGAATCCGAGCAGGTGATACCAGTGCTCAATACGAGGGTAACCTTGAAGCGTGGCTAAGCGCAGCTTTGAGCAACCAAGACACGTGCCTTGAAGGCTTTGAAGGCACTGATAGGCGCCTTGAGAGTTACATCAGTGGAAGCTTAACACAAGTAACGCAGCTTATAAGCAATGTTTTGTCTTTGTATACACAACTTCATAGGTTACCCTTTGGTCCTCCGAGGAAGAGTAACGTGACAAGTGAAAGCTTTGTATTTCCTGAATGGATGAGCGAGGGTGACCAAGAGCTACTCAAGTCCGAGCCACATACACGTGCAGACGCGGTTGTGGCCTTGGATGGGAGTGGTCACTACCGCACCATCACTGATGCAGTTAATGCGGCTCCGAGCCATAGTAACAGGAGGTATGTAATATACGTGAAGCAGGGCCTTTACAGGGAGAATGTGGATATGAAGAAGAAGATGACCAACATCATGCTCGTTGGTGACGGTATTGGCAAAACTATTGTCACAAGCAACCGAAATTTCATGCAAGGATGGACCACTTTTAGAACTGCTACACTAGGTAAGTGA 945 0.4815 MALLNFLFILMLLPTFDALSGEIPTGIETQDLNALIAQACMNIENQNSCLTNIQNELVKIGPPSPTSVLSAALGATLNEARGAIDKITKFTTFSVSYREQQAIEDCKELLDFSVSELAWSMGEMRRIRAGDTSAQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHRLPFGPPRKSNVTSESFVFPEWMSEGDQELLKSEPHTRADAVVALDGSGHYRTITDAVNAAPSHSNRRYVIYVKQGLYRENVDMKKKMTNIMLVGDGIGKTIVTSNRNFMQGWTTFRTATLGK* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3337 314 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 191 IPR035513 -
Dod01g3337 314 PANTHER PECTINESTERASE 6 312 - -
Dod01g3337 314 Pfam Plant invertase/pectin methylesterase inhibitor 35 186 IPR006501 GO:0004857
Dod01g3337 314 SMART PMEI_2 31 186 IPR006501 GO:0004857
Dod01g3337 314 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 191 IPR035513 -
Dod01g3337 314 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 191 IPR006501 GO:0004857
Dod01g3337 314 CDD PMEI-like_3 39 192 - -
Dod01g3337 314 Pfam Pectinesterase 231 313 IPR000070 GO:0030599|GO:0042545
Dod01g3337 314 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 6 312 - -
Dod01g3337 314 SUPERFAMILY Pectin lyase-like 228 312 IPR011050 -
Dod01g3337 314 Gene3D - 226 313 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3337 Dod-Chr1 74503508 74504870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3337 1 313 Carbohydrate Esterase AT3G05620 48.160 5.69e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3337 K01051 - gmx:100810565 513.457