Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3334 ATGGGGCACTTTTCCTCTATGTTCAATGGGTTGGCAAAGTCATTTTCAATAAAGAAGGGAAGAAGTCCTGGGAGATGTGGCGGTAGAGAAGCTGCTCAGGCAATGGCCAAGGAAGCTAAGAAGAATGACTTGCTTCTGTGTAGCTCCGGCACTGTTAGTGTTGACGGTTCAAACAACTTCGCCTCAGTGTTTTCCAAAAGAGGCCAGAAAGGAGTGAACCAGGATTGCTGCATAGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATCTTCTGCGGGATCTTTGATGGGCACGGGCCATGGGGTCACTTTGTGGCGAAAAGAGTAAGAGAGTCGATGCCACCATCTTTGCTTTGCAACTGGCAGGAGACGCTTGGCCAAACTTCACTTGATCCGGAGATTGATATAGAGGAAGAGAAAAGGCAACAGCGGTTTAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCTATTGATCAGGAACTAGAGCAGTATCGCAAGATTGACTCATTTTACAGCGGAACAACTGCCCTCTCAATTGTTAGACAGGGCGAACTCATTATCATAGCTAATGTCGGTGACTCGCGTGCTGTATTAGCTACAACATCAGATGATGGGAGTTTGGTACCAGTGCAGCTAACAGTTGATTTTAAGCCCAGTTTACGCCAGGAGGCAGAGAGAATAATTCAGTGCCAGGGGAGGGTGTTCTGCCTACATGACGAGCCCGGGGTGCACAGGGTGTGGTTGCCAGATGAGGAGTCTCCAGGACTAGCCATGTCTAGGGCTTTTGGGGACTATTGCATCAAGGAGTATGGTCTTATATCCGTGCCTGAGGTAACACAAAGGAATATAAGCAGCAAAGACCAATTTGTTGTGCTAGCCACTGACGGGGTTTGGGATGTAATCTCGAATCAAGAAGCAGTAGATATTGTATCATCAACACCAGACAAAGCAAAATCAGCTAAGCGTCTGGTGGAGTGTGCGGTGCTTGCATGGAAACGCAAGAGGCGGGGCATTGCCATGGATGACATCTCAGCTATTTGTCTCTTCTTTCACTCTTGTTCGCCTCAGCAAGTAACACAACTTGCCACCCTAAAATAG 1104 0.4755 MGHFSSMFNGLAKSFSIKKGRSPGRCGGREAAQAMAKEAKKNDLLLCSSGTVSVDGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLGQTSLDPEIDIEEEKRQQRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATTSDDGSLVPVQLTVDFKPSLRQEAERIIQCQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCIKEYGLISVPEVTQRNISSKDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKSAKRLVECAVLAWKRKRRGIAMDDISAICLFFHSCSPQQVTQLATLK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3334 367 CDD PP2Cc 59 352 IPR001932 -
Dod01g3334 367 SMART PP2C_4 51 350 IPR001932 -
Dod01g3334 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Dod01g3334 367 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 359 - -
Dod01g3334 367 Pfam Protein phosphatase 2C 76 325 IPR001932 -
Dod01g3334 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 359 - -
Dod01g3334 367 SUPERFAMILY PP2C-like 53 353 IPR036457 -
Dod01g3334 367 Gene3D - 51 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3334 Dod-Chr1 74457316 74461419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3334 1 353 PP2C-type Phosphatase Gene Family AT3G05640 74.085 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3334 - - gmx:100808955 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3334 01 74457316 74461419 Dod06g1810 06 25991098 25996670 PCT