Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3330 ATGAGTAAGGCTGAATTGTCATCATCAAGGACAAGGATGAAGGCACAGCCTGTTGCGTTGGCGACTCTGATTGGTCGTGAGCTTCGAAGTGAAAAAGTCGAAAAGCCTTTTGTGAAATATGGGCAAGCTGGCTTGGCCAAGAAAGGAGAAGATTACTTCCTAATCAAGACGGATTGCCTGAGGGTTCCGGGGGATTCATCCACAAAGTTTTCTGTCTTTGCGATATTTGATGGGCATAATGGTATATCAGCTGCTATTTTTGCGAAGGAAAACTTGCTAAGCAATGTTTTGAGTGCAATACCTGAAGATATCAGCAGGGATCGAGATGTGTGGCTCCAGGCCCTTCCTCGAGCTCTTGTTGTTGGTTTTGTGAAAACTGACATAGAATTTCAGCAAAAGGGGGAAACTTCTGGAACAACTGCTACGTTTGTTCTGATAGATGGGTGGACTGTAACTGTTGCATCTGTTGGGGATTCCCGCTGCATACTAGATACTCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGATCACAGACTGGAAGAGAATGTAGAAGAGAGGGACCGTGTTACTGCCAGTGGTGGTGAAGTGGGAAGGCTCAATGTATATGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGCGACACAGATGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCTAAGTCTTGTCAAGGTCTACCTGCTGAGCTTGCAGCAAAGCTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTAAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCTTTGGACCTTCCTGTATTACCACCAATTCCGAGAAAGAAACCTAATATGCTAACTTCGCTTCTTTTCGGAAAGAAATCTGAGAAGTCTACAAACAAAGCTACTAGTAAGCTTTCTGCAGTGGGTGTCGTGGAGGAGTTATTTGAAGAGGGGTCTGCAATGCTTGCAGAAAGGCTGGGTAAGGATTTCCCGTTTAATAAGAATTCTGGGATTTTTCGCTGTGCGGTTTGCCAAGTTGATCAACCTCCTGGTGATGGCTTATCAGTGAACTCCGGACCTTATTTCTCTCCAGCATCTAATCCATGGGAGGGGCCATTCCTCTGCACAAACTGTCGGAGGAAGAAAGATGCCATGGAAGGAAAAAGACCTAGCAGACCCACAGTAACAGCATAG 1305 0.4529 MSKAELSSSRTRMKAQPVALATLIGRELRSEKVEKPFVKYGQAGLAKKGEDYFLIKTDCLRVPGDSSTKFSVFAIFDGHNGISAAIFAKENLLSNVLSAIPEDISRDRDVWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERDRVTASGGEVGRLNVYGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCQGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPLDLPVLPPIPRKKPNMLTSLLFGKKSEKSTNKATSKLSAVGVVEELFEEGSAMLAERLGKDFPFNKNSGIFRCAVCQVDQPPGDGLSVNSGPYFSPASNPWEGPFLCTNCRRKKDAMEGKRPSRPTVTA* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3330 434 Pfam Protein phosphatase 2C 66 272 IPR001932 -
Dod01g3330 434 SUPERFAMILY PP2C-like 41 303 IPR036457 -
Dod01g3330 434 SMART PP2C_4 27 301 IPR001932 -
Dod01g3330 434 ProSiteProfiles PPM-type phosphatase domain profile. 36 303 IPR001932 -
Dod01g3330 434 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 3 433 - -
Dod01g3330 434 PANTHER ALPHABET, ISOFORM E-RELATED 3 433 - -
Dod01g3330 434 SMART PP2C_SIG_2 54 303 IPR001932 -
Dod01g3330 434 CDD PP2Cc 47 303 IPR001932 -
Dod01g3330 434 Gene3D - 37 305 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3330 Dod-Chr1 74407112 74410644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3330 8 433 PP2C-type Phosphatase Gene Family AT1G09160 76.526 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3330 - - gmx:100807886 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3330 01 74407112 74410644 Dod01g3330 01 74407112 74410644 ECH