Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3329 ATGTCAACCGAACAAGTTTTGCCATTCTCTGTTTTATCTGTGGTTGAAGATGTTCTTCAACAGCATGGTGGTCGCCGATTAAGCGACGTCAACTTGGCGTCAAGGAAAGCTGAAGAAGCTTCTTTGAGACGGTATGAAGGTGCTGGGTGGCTACGAAAGACAATTGGAGTTGTTGGAGGGAAAGACTTGCCAGCTCAGCCTTCTGAAGAAGACTTCAGGATTGGGTTGCGCAGTGGGATCATCCTCTGCAATGTTCTTAACAAAATTCAACCCGGATCAGTGCCCAAGGTAGTTGAAGGCCCCAGTGATTCTGTTCTTATTCCCGATGGGGCAGCACTATCTGCGTTTCAATACTTCGAAAATGTAAGGAACTTTCTTGTAGCCGTGGAGGAAATGGGGCTTCCCACCTTTGAAGCTTCAGATTTGGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTTTAGCGCTCAAGTCCTATGCTGAATGGAAATTGGGAGGAAAAATTGGGTCATGGAAATTTGGTGGGGTTGTGAATTCAAAGCCACCTACCTCTGGAAAACCACTTTCGAGGAGAAACTCAGAACCATTCATGAAGTCTTTGTTGACTACGTCATTTGGGGACAGAGATGGTAGCATGAGTGATCACTCTTCATACACTGAATCCGCGCATGATCGAAGTGAAGGGGCTTCCTTAAATTCATTAGTTCGCCAATATTTATCTGACAAGAAGCCAGAAGAAATTCCCATTGTAGTGGAGTCCCTACTTAGCAAAGTCATGGAGGAGTTTGAACATCGCTTGCTGATCCAGCATGAAACATTTAAACCAACTCAAGAAGACAAGGCATCATCTGAAGCAGAATCTTCAATTTCAAAAGCTGCTTCTATCGATGAAGAGATGGAAGAAAAGGAAGATGCACAGGACCTGGAGCTTAAACAGGAGGAAAGTTATGATGAGAACTACAATGGTTGTGAAGAACCAAGCAGCCAGATTTCAAAACAGCAAAAGTTGGTCCAACAACAAGATAGAAGCTTCCAGGAATTGAAAGCTATTGTCCATCAAACAAAATCAGGAGTGCAGTTTCTGCAAAAGAAGTACCAGGAAGAGTTGATCTCTCTAAGTAAGCACGTGCATAGCTTAGCATCTGCTGCTTCAGGATATCATAAAGTTCTTGAAGAGAATCGTAAATTGTACAATCAAGTGCAGGATTTAAAAGGAAATATTAGGGTGTACTGCCGAGTTCGACCCTTCTTAGGCGGTCAACCAAGCCATCACAGCACTGTCAGCAATTTGGAGGAGGGAAGTATCTCAATCATAACGCCTTCCAATTATGGGAAAGAGGGGAAGAAAACATTTAATTTTAACAAATGTTTTGGTCCTTCTGCAACACAAGGGGAAGTTTTCTCAGATACTCAGCCTTTGATTCGTTCTGTTCTGGATGGGTACAATGTCTGCATATTTGCTTATGGTCAGACAGGATCAGGAAAAACATTCACCATGTCTGGGCCAGACGATCTTACAGAGGAAACCATGGGTGTTAACTACCGTGCACTCAGAGATCTTTTCCTCCTCTCAGATCAGAGGAAAGACACCATTTCCTATGAAATCTCTGTTCAGATGCTTGAGATTTACAATGAACAAGTCAGAGACCTACTAGCCACAGATGGTGCTAACAAAAGATATCCTTTCTCTATATATACTTATTCCAACAATGGCCTTAACGTGCCTGATGCAAACCTTGTTCCTGTTTCATCAACTGCTGGTGTCATAAACTTGATGAACTTGGGACAGAAGAATCGGGCTGTTGGTGCTACTGCCATGAATAATCGCAGTAGTCGCTCTCACAGTTGCCTAACAGTTCATGTTCAAGGAAGGTACCTGACATCAGGAAAAACTATTCGTGCTAGCATGCATCTTGTTGATCTAGCAGGAAGTGAGAGGGCTGATAAAACTGAGGCCACGGGTGATAGACTTAAGGAAGCTCAGCATATCAACAAGTCACTTTCTGCCTTAGGAGATGTGATTTCTTCCCTCGCCCAAAAGAATTCCCATGTTCCCTACAGGAACAGTAAGCTTACCCAGCTGCTTCAGGATTCTCTTGGAGGGCAAGCTAAGACGCTCATGTTTGTTCATATTAGTCCGGAGCATGATGCACTTGGAGAAACACTTAGTACACTCAAGTTCGCTGAACGGGTAGCCACTGTTGAGCTTGGTGCTGCGCGAGTCAACAAGGACAGTGCAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCATCCTTAGCAAGGAAAGAGGGAGAAGCAGAACACTTTCATCAACCCGTCAATAGCAACGACGAAATACCAAAGTTGAAATCTTATGTTTCTATTCCTGTACAACGTAGTTTGACTTCTTCTGTAGGTCGTAAGCTGCCAACAGATGATTCTAGTAGCCTAGAGGGCAAGAAAAAGGCTGCATCAATGCTGAAAAGACGAAGCTTAGATATCCACGACATGTATAGAAATTCACCGAGGTGGCCACACGGTGGCAGTCAAGGGGTAAATGTAAAGGAGGAAGATAAGGAATCAATTTCTGGGGATTGGGTGGACAAGATCACAATGAGCAGGACTGACAGCTTTACTAGTGATGATAGCCTGGTGGCACAATGGGAAGCAGAAAACAAACAATTCTCTCCATTGTTAAGTCCCAGTTATCTTTCAGAGCCACACTACTTGCATAAAAAGGATGCCCAAGACTATGAAGATTTACATAGGCAAGGATATGAGATGGCCTCCACAGATGATGAACTTGAGATTGCAACTAGTGATTCCTCAGAGTCAGACGTTAATTGGCTGCATGCACCTAAACCAACTAGCCTTTCAAACGGATTAGGGTCTAAACCTAAGAAATCTACTAATCCCAGACCAGCAAAGAACCCAGAAACCAGGAGTATGATCCCATCATTAATTCCTGCACCATCAAGGAAACAAACCACAGTAGTTAGTCAACTCAGAAAGCATCCAGGCACTATTGATGTAAAGAGAAGAACTGGGAATGCCAAGTGA 3054 0.4348 MSTEQVLPFSVLSVVEDVLQQHGGRRLSDVNLASRKAEEASLRRYEGAGWLRKTIGVVGGKDLPAQPSEEDFRIGLRSGIILCNVLNKIQPGSVPKVVEGPSDSVLIPDGAALSAFQYFENVRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYAEWKLGGKIGSWKFGGVVNSKPPTSGKPLSRRNSEPFMKSLLTTSFGDRDGSMSDHSSYTESAHDRSEGASLNSLVRQYLSDKKPEEIPIVVESLLSKVMEEFEHRLLIQHETFKPTQEDKASSEAESSISKAASIDEEMEEKEDAQDLELKQEESYDENYNGCEEPSSQISKQQKLVQQQDRSFQELKAIVHQTKSGVQFLQKKYQEELISLSKHVHSLASAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGQPSHHSTVSNLEEGSISIITPSNYGKEGKKTFNFNKCFGPSATQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDDLTEETMGVNYRALRDLFLLSDQRKDTISYEISVQMLEIYNEQVRDLLATDGANKRYPFSIYTYSNNGLNVPDANLVPVSSTAGVINLMNLGQKNRAVGATAMNNRSSRSHSCLTVHVQGRYLTSGKTIRASMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEHDALGETLSTLKFAERVATVELGAARVNKDSADVKELKEQIASLKASLARKEGEAEHFHQPVNSNDEIPKLKSYVSIPVQRSLTSSVGRKLPTDDSSSLEGKKKAASMLKRRSLDIHDMYRNSPRWPHGGSQGVNVKEEDKESISGDWVDKITMSRTDSFTSDDSLVAQWEAENKQFSPLLSPSYLSEPHYLHKKDAQDYEDLHRQGYEMASTDDELEIATSDSSESDVNWLHAPKPTSLSNGLGSKPKKSTNPRPAKNPETRSMIPSLIPAPSRKQTTVVSQLRKHPGTIDVKRRTGNAK* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3329 1017 PRINTS Kinesin heavy chain signature 482 503 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 PRINTS Kinesin heavy chain signature 606 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 PRINTS Kinesin heavy chain signature 686 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 PRINTS Kinesin heavy chain signature 637 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 771 IPR027417 -
Dod01g3329 1017 ProSitePatterns Kinesin motor domain signature. 636 647 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dod01g3329 1017 ProSiteProfiles Kinesin motor domain profile. 408 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 MobiDBLite consensus disorder prediction 987 1001 - -
Dod01g3329 1017 Pfam Kinesin motor domain 414 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 MobiDBLite consensus disorder prediction 836 858 - -
Dod01g3329 1017 CDD KISc_C_terminal 406 738 - -
Dod01g3329 1017 ProSiteProfiles Calponin homology (CH) domain profile. 41 163 IPR001715 GO:0005515
Dod01g3329 1017 Gene3D - 34 164 IPR036872 -
Dod01g3329 1017 SUPERFAMILY Calponin-homology domain, CH-domain 45 172 IPR036872 -
Dod01g3329 1017 MobiDBLite consensus disorder prediction 275 338 - -
Dod01g3329 1017 MobiDBLite consensus disorder prediction 935 1017 - -
Dod01g3329 1017 Coils Coil 388 408 - -
Dod01g3329 1017 MobiDBLite consensus disorder prediction 205 229 - -
Dod01g3329 1017 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1011 - -
Dod01g3329 1017 SMART kinesin_4 406 744 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3329 1017 Gene3D Kinesin motor domain 403 777 IPR036961 -
Dod01g3329 1017 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1011 - -
Dod01g3329 1017 MobiDBLite consensus disorder prediction 323 338 - -
Dod01g3329 1017 MobiDBLite consensus disorder prediction 939 975 - -
Dod01g3329 1017 Coils Coil 743 770 - -
Dod01g3329 1017 Pfam Calponin homology (CH) domain 49 163 IPR001715 GO:0005515
Dod01g3329 1017 MobiDBLite consensus disorder prediction 275 300 - -
Dod01g3329 1017 SMART ch_5 43 161 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3329 Dod-Chr1 74365360 74371344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3329 396 772 Calmodulin-binding Proteins AT5G65930 39.578 7.19e-73 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3329 K10406 - gmx:100799535 1434.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3329 01 74365360 74371344 Dod01g3329 01 74365360 74371344 ECH