Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3320 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACGCCGTTCTTGGGATTCGCAGGGATGCCTCCTTCTCTGATGTTCGCACTGCCTACCGCCAGCTTGCTATGAAGTGGCACCCGGATAAATGGGCCCGGAATCCAGCAACAGCAGGAGAGGCTAAGCGCCGTTTTCAGCAAATCCAGGAAGCTTATTCAGTTCTCTCGGATCAGTCTAAGAGGTCAATGTACGATGCCGGGCTTTACGATCCTTTGGAGGAAGAAGATCAAGAATTCTGTGATTTCATGCAAGAAATGCTCTCAATGATGAACAATGTCAAAGACGAGGGCGACAATTTGGAGGACCTACAAAGGATGTTCGTGGAGATGGTGGGTGGAGATGCGATGGGCTTCGATTTGAACCAGGATCAGAAGGATCCGACGGCTGGCAAGAGAGGACGAGGCAGTGGATCAAGAGGCAACCCACCCAAGCGCAGCAACTCTCGTTGCTAG 492 0.5203 MDREGGSNGGSCYYAVLGIRRDASFSDVRTAYRQLAMKWHPDKWARNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQEFCDFMQEMLSMMNNVKDEGDNLEDLQRMFVEMVGGDAMGFDLNQDQKDPTAGKRGRGSGSRGNPPKRSNSRC* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3320 163 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Dod01g3320 163 MobiDBLite consensus disorder prediction 130 163 - -
Dod01g3320 163 PANTHER PUTATIVE, EXPRESSED-RELATED 9 147 - -
Dod01g3320 163 Coils Coil 96 116 - -
Dod01g3320 163 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Dod01g3320 163 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Dod01g3320 163 Pfam DnaJ domain 13 78 IPR001623 -
Dod01g3320 163 Gene3D DnaJ domain 2 104 IPR036869 -
Dod01g3320 163 PANTHER PUTATIVE, EXPRESSED-RELATED 9 147 - -
Dod01g3320 163 CDD DnaJ 12 70 IPR001623 -
Dod01g3320 163 PRINTS DnaJ domain signature 14 32 IPR001623 -
Dod01g3320 163 PRINTS DnaJ domain signature 32 47 IPR001623 -
Dod01g3320 163 PRINTS DnaJ domain signature 53 73 IPR001623 -
Dod01g3320 163 SMART dnaj_3 11 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3320 Dod-Chr1 74304266 74305488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3320 12 79 C2H2 Transcription Factor Family AT1G74250 42.029 2.06e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3320 - - gmx:548049 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3320 01 74304266 74305488 Dod01g3320 01 74304266 74305488 ECH