Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3319 ATGGATTTGAATAATAACAAGAGGCAATTTCAGCTTGAGGGTGATGAAAGTGTTCATCAGATTCTAGCTCAAGCCTCAAAGCGGAAACGTGAAGATACTAATTCACAAGAGCCGGAAAGCAGTGTCAACATTGGAAATTTGTGGTCTATACTGGGCATAGATACTGCCATGATCGGGCAGCATTTGGCATGTTTGGTTGAAAAAATTGTACATGAAGAGTTAGAGCGCCAACTATTAGTTCCAAGACCAACTATTACTGACACTGGACCATCTGAGGAGAAATTCTTTAAGCTGGTTTTTGAGAATGATTTGCCTCATACGCTTTTTACATTCTCCAATATCAAAGCTAAAGATGATAACAGGCTTGTTGAGATTGGTCTATATGATATTAGATCTCAGTCAAAAGTCACTGCTGGTTCACTGTCTTCAGTCAACATAGGTATTTGTGTCCTTGATGATGATGTGTTCGGTTCGAATGGCAGTGAGGATTGGACAACAGACCAATTCAACAAGGCCAAAATCTTACGTCAAGGAGAGAATAAAGGGCGGTTACTGAAAGGAGATGTGGTCATTTCACTAAAAAATGGAGTTGGTTTTATCGACAAAATTGTGTTCACTGGTAACTCAAGCCGAACAAGAAGCCGACATTACAGGTTAGGAGCATTTGTGCAATCAACTTCCAATGCAGCAGAGGTCAAAGAAGCTGTAAGTAATCGTTTTATGGTCAAGGAGAACACAGGAGAGGGCAAACAGAAGCGTGACCGTCCGGTCCTCACTGATCCAATATGGCGTTTGAAAAATATATCAAGAGAAGGGCCAGTCCGTGAGCGGCTGTCTAAGCTTAAAATAAACACTGTCGAGGATCTGTTGCATATAAACGAAACCAATCCATCTTTATTGCAAGATCAGAAATCTGGCAGGATTTCATCAAAGCTACAGGAAGCAATTAAGCACGCTAAGACTTCTATTCAGGAAGTGACGTCCAGTGGACAGAACTGTAATCGTTCACTGATTACTCTCAACCTCGATGAGAAGGTTTATATACCTCCGTATTGTACATATGTTAAATGCTGCCCGACTTTTGACTCTAGCGTTGACGTCTATTTGATTATAGTAACAAGTAATTGCTGCCCGACTTTTGACAAAACGGTAATTGTACCTGTTGATGTCTACTTTCCAAGGCCATTGGCAAGTCTACAACAAGTGGCAGGGCAATGCAGTGCTCCGGATTTGCAAGTACTTGATTTGGCAACTACTGCGCAGCAAGGTCATAAACTAGAAAAAAGGCAAGATTTTAGCCAACCGTCTACCTCAACATCACACATTGATGAAGCATGCGCAGCATATACTAACCAAATTGCTCTCGAAGAGCTATATGGAATGTGCATGGAAGGGAATGATACATCCCTTGATCTTGGACCACATGTTCCAACAGACTTGGCTGATGTTTTGAATAATTAA 1461 0.4127 MDLNNNKRQFQLEGDESVHQILAQASKRKREDTNSQEPESSVNIGNLWSILGIDTAMIGQHLACLVEKIVHEELERQLLVPRPTITDTGPSEEKFFKLVFENDLPHTLFTFSNIKAKDDNRLVEIGLYDIRSQSKVTAGSLSSVNIGICVLDDDVFGSNGSEDWTTDQFNKAKILRQGENKGRLLKGDVVISLKNGVGFIDKIVFTGNSSRTRSRHYRLGAFVQSTSNAAEVKEAVSNRFMVKENTGEGKQKRDRPVLTDPIWRLKNISREGPVRERLSKLKINTVEDLLHINETNPSLLQDQKSGRISSKLQEAIKHAKTSIQEVTSSGQNCNRSLITLNLDEKVYIPPYCTYVKCCPTFDSSVDVYLIIVTSNCCPTFDKTVIVPVDVYFPRPLASLQQVAGQCSAPDLQVLDLATTAQQGHKLEKRQDFSQPSTSTSHIDEACAAYTNQIALEELYGMCMEGNDTSLDLGPHVPTDLADVLNN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3319 486 Pfam Calmodulin binding protein central domain 258 322 IPR046830 -
Dod01g3319 486 Pfam Calmodulin binding protein-like N-terminal domain 96 244 IPR046831 -
Dod01g3319 486 PANTHER OS02G0177800 PROTEIN 33 322 IPR012416 GO:0005516
Dod01g3319 486 PANTHER CALMODULIN-BINDING PROTEIN 33 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3319 Dod-Chr1 74263183 74267894 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3319 62 323 Calmodulin-binding Proteins AT5G62570 33.582 3.20e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3319 - - gmx:100798493 254.988