LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g3317	ATGACCGGGCAGTGTGTGGCAGATTTAGTTGCAAGAATTGTACATGAGGAGCTCGAACGCCGACTATCAGATCCAAGACCAACTATTACTGAGGCTGGACCATCTGAAGCCAAATTCTTTAAGCTGGTTTTTGAGAGTGAGTTGCCTCGTACGGTTTTTACACTCTCCAATATCAGAGCTAAAGGTGATGCTAACAGGCTTGTTGAGATTACTCTATATGATACTAGATCTCAGGCAAAAGTCACTGCTGGTTCACTGTCTTCAATCAACATAGAGATTTGTGTCCTTGATAATGATGCATTCGGTTCGAATGGCAGTGAGGATTGGACCACAGACCAATTCAAGGCCAAAATCTTACGTCAAAGAGAGAATAAAGGGCAGTTACTGAAAGGAAATGTGGTTATTCCACTAAAGAATGGAGTTGGTTATATCGACAAAGTTATGCTCACTGATAACTCGAGCTGGACAAGAAGCCGCCATTTCAGGTTAGGAGCCTTTGTGCAATCAACTTCCAAAGCAGCAGAAGTCAAAGAAGCTATAAGTAATCCTTTTGTGGTCAAGGACAGCAGAGGAGAGGTGTGTAAGAAACACTACCCTCCATCCTTGAATGACGATATATGGCGTTTGAAGAAAATAGGCAAAGATGGAAAAATCCACGAGCGGCTCTCTCTCCATGGAATTCACACTGTCAGAGATCTGTTGCGACTATACACAATCAACCCATCTTCCTTATATCAGAAGTGTGGCAACATTCCTAGAAAGTCATGGGCAGCAATTACTGAACATGCCAAGACATGCATGATAGATGATCACAAGCTTTTGAGCTATCAAACAGCAGACCAACCAGTAGTCCTGCTATTCAATTCCATCTACATCCTTGTGGGAGTGATATTTGATGGACAAAACTATCGTTCACTAGATAATCTCACTCCTAATGAGAAGCATTTGGTGGAATTTGTGAAGCAGCACGCCTACAAAAATGTGGATGATTTTAAATCAATTGATGAGGCATCATTAAACTGCTTTAGCTTTAGGCCAGCAGCATGTCTAAGAGCAGGGCTGTCTGATGGTCCAGACCAAGTTTTTCAAGAGATTAATGTATCAACAGGACAAGGCATGCATAATGGTCAACAAGAAGCATGGCCAGGTTCTACTCAACCCTTCATCTCTGCTTCATATATTGATGGAGGAGTACCTAATTACCAAATCTCTGCTGATCCATTGCCAGACACAAGTGAAATGCAACAAAACAGTTATGCAGAAGAATTTAGCAGTCATTCCTCTTTCCTCAATTCTGCTGTTGATATATCAAGCAGTGTGAAACCCAAAGCGGTGTGGTTTAAGATTCGGAATGCTCTCAAATGGAGACTATCAGGCAGAAGGATCAGAGCTGAGGACGGTTCCAAGCTTCAAATCGCGCTGTGTGACACCACATTTCAGCACCGCAAGGTAAAGGAAGATGCCTCCCCCATCAGGGTCCAGATATGTGTCCTGAAGGGAGACTTTGGATCCAATGGAAGTGAGGATTGGACTGCTGAGGATTTCAATGCCAGCGCCTTACGCCAAAGAGAGGGGAAACCACCATTGCTGAGTGGAGACAAGGTTGTTACACTCAAAAATGGTGATGGTTATGTCGAGAACATTGTCTTCACTGACAACCCTAGCTGGACAAAAAGTAGCAAGTTCAGGCTAGGACTTAAAGTATGCCGATCAACTTCCAACGAAGTAGACATAAAAGAAGGAAGAAGTGACCCTTTAAGGGTCAAGGACAAGAGAGGAGAGGCATGCGAAAAACCTGATCTACCTTCACTGAATGATAAGGAATGGCGTCAGCGAAAGATAAGAAAAGATGGTAAAATTCACAGGCAGTTATCCTTGCTTGGCATAAAAACTGTCAACAATCTGTTGCAGCAGTACACAACTGATGAAGCTTTACTACAACAGAGAATTGGAAACATTCGAGGGACATCATTGGATAAGATTATTGAGCATGCTAATGCTTGTGAGATAGACGATCATGAGCGCTACATCTATCAGGATTTTGCTGCAGAACAATCAGTATCCCTTGTCTTTAATTGCATCTATAAGGTTTTGGAGGTGTCTTTTTGTGGCCAAAATTATTGCTCTCTAGATTCTTTGAATTTGGTAGAAAAGCGTTTGGTGGAAATAGTAAAGCAACAAGCTTACAGCAACTTGAACTATCTGAAGCCATATGAGCCCACACGACACAGCTTGTTGACATCGGCAACTATGCATGGTGGTGTTCCATTTCAAGGTCTGCAACAGTTTTACCACCCAATTGCTCCGCAAGGTCCTTTTGTTAATAACTTAACTGGCCAACAACAAACGTGGCCAAATTTGTGTCAACCGTCCACCTCAACAAATGCACTTATTGATGAAGCCGCACTCGGTAGCCAAGTAGGTTCCAGTCCACTGCCAGATCATTTGGAAAAAATAATGAGGCCAAACTTGCCTGCGAGAGAGCACCTTATCTCTGAAGCATGTATTGTTCATCATAACAGATGGCCCATCAGTGGATCACAGATTGATCCATCTGCAATCTGCTTCACCCCTACTACTATCCTATGGGAGCAGCAAATAGAGTCTTTCTGCAATACTTTTGATTATGGAGCAGAATCTATCAAACCTGTGCATACATCAAGCAAAGGGAGAGCCAAGACAGTCTGGGGAAAGATTCGAACGTTTCCAAATGTTCTCAAATGGTTTGCAGAAATTGCAGTTCAAAGGAAGGCAAAAGTCTTTCACTATCAGGATTGA	2778	0.4273	MTGQCVADLVARIVHEELERRLSDPRPTITEAGPSEAKFFKLVFESELPRTVFTLSNIRAKGDANRLVEITLYDTRSQAKVTAGSLSSINIEICVLDNDAFGSNGSEDWTTDQFKAKILRQRENKGQLLKGNVVIPLKNGVGYIDKVMLTDNSSWTRSRHFRLGAFVQSTSKAAEVKEAISNPFVVKDSRGEVCKKHYPPSLNDDIWRLKKIGKDGKIHERLSLHGIHTVRDLLRLYTINPSSLYQKCGNIPRKSWAAITEHAKTCMIDDHKLLSYQTADQPVVLLFNSIYILVGVIFDGQNYRSLDNLTPNEKHLVEFVKQHAYKNVDDFKSIDEASLNCFSFRPAACLRAGLSDGPDQVFQEINVSTGQGMHNGQQEAWPGSTQPFISASYIDGGVPNYQISADPLPDTSEMQQNSYAEEFSSHSSFLNSAVDISSSVKPKAVWFKIRNALKWRLSGRRIRAEDGSKLQIALCDTTFQHRKVKEDASPIRVQICVLKGDFGSNGSEDWTAEDFNASALRQREGKPPLLSGDKVVTLKNGDGYVENIVFTDNPSWTKSSKFRLGLKVCRSTSNEVDIKEGRSDPLRVKDKRGEACEKPDLPSLNDKEWRQRKIRKDGKIHRQLSLLGIKTVNNLLQQYTTDEALLQQRIGNIRGTSLDKIIEHANACEIDDHERYIYQDFAAEQSVSLVFNCIYKVLEVSFCGQNYCSLDSLNLVEKRLVEIVKQQAYSNLNYLKPYEPTRHSLLTSATMHGGVPFQGLQQFYHPIAPQGPFVNNLTGQQQTWPNLCQPSTSTNALIDEAALGSQVGSSPLPDHLEKIMRPNLPAREHLISEACIVHHNRWPISGSQIDPSAICFTPTTILWEQQIESFCNTFDYGAESIKPVHTSSKGRAKTVWGKIRTFPNVLKWFAEIAVQRKAKVFHYQD*	926

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g3317	925	Pfam	Calmodulin binding protein central domain	201	266	IPR046830	-
	Dod01g3317	925	Pfam	Calmodulin binding protein central domain	604	668	IPR046830	-
	Dod01g3317	925	Pfam	Calmodulin binding protein C-terminal domain	675	738	IPR046829	-
	Dod01g3317	925	Pfam	Calmodulin binding protein C-terminal domain	272	333	IPR046829	-
	Dod01g3317	925	Pfam	Calmodulin binding protein-like N-terminal domain	40	188	IPR046831	-
	Dod01g3317	925	Pfam	Calmodulin binding protein-like N-terminal domain	459	591	IPR046831	-
	Dod01g3317	925	PANTHER	OS02G0177800 PROTEIN	6	461	IPR012416	GO:0005516
	Dod01g3317	925	PANTHER	OS02G0177800 PROTEIN	461	918	IPR012416	GO:0005516
	Dod01g3317	925	PANTHER	CALMODULIN-BINDING PROTEIN	6	461	-	-
	Dod01g3317	925	PANTHER	CALMODULIN-BINDING PROTEIN	461	918	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g3317	Dod-Chr1	74234247	74258095	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod01g3317	447	739	Calmodulin-binding Proteins	AT5G57580	37.288	2.70e-50	186

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g3317	-		-	gmx:100805759	436.417