Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3316 ATGATTCCACCTATATTAGAAGAGGTGATTCCACCCATGCTCCAGCGTTATGTTTCGCCACGTTGTGGATTACCGCTTAACCGGCAGCAGATTGGCCCATCGGGAGGCAGAGCTTTGCAATTGTGTTTCATGAACAGATTGCCTTCAACAATTTTCACTGGGAGGAAGATCAGAGCTGAGGACGGTTCCAAGCTTCAAATAGCGCTGTGTGATGCCACATTTCAGCACCCCCGAGTCAAGGAAGATGCTTCCTCCATGAAGGTCCAGATATGTGTCCTGGATGGAGACTTTGGATGCAATGGAAGTGAGGATTGGACTGCTGAGGATTTCAATGCCAACATTTTAGTCCCAAGAAAGGATAAACCACCGTTGCTGAATGGAGACAAGGTTGTTACCCTCAAAAACGGTGTTGGTTATGTCGAGAACATTGTCTTCACGGACCCCTCTTGCTGGACAAAAAGTAAAATGTTCAGGCTAGGACTTAAAGTATGGCAATCAACTTCCAATGGAGTAGGCATAAAAGGAGGAAGAAGTGAACCCTTAAGGGTCAAGGACAAGAGAGGAGAGGTATACAAGAAACATGATAAACCTTCATTGGATGATAAGGTATGGCGTCTGAAAAGGATAAGACAAAATGGTGAAATTGACAGGAAGCTATCCTCGCTTGGAATAACAACTGTCAAGAATCTGTTACGGTGGTACACAATCGATAAAGCTTCACTACTGCAGGGAATTGGAGGTATTCCAGGGACGTCATGGGATAAGATTATTGAGCATGCTAATGCTTGTGAGAAAGACGACCATGAGCGCTACATCTATCAGGGTTTTGCTGCAGAACAATCGGTATCCCTTGTCTTTAATTGCATCTATAAGGTTTCGGAGGTGTCTTTTGATGGCCAAAATTATTGTTCTCTAGAATCTTTGAATTTGAAAGAGAAGAGTTTGGTGGAAATAGTAAAGCAACAAGCTTACAGCAACTTGAACGATCTGAAGCCATATGAGCCCGCACCACACAGCTTGTTGACATTGGCAACTATGCATCGTGGTGCTCCAGATCAAGGTCTGCAACAGTTTTACCACCCAATTGCTCCGCAATGTCCTTTCAGTAATAATTTAACTGGTCAACAACAAACGTGGCCAAATTTGTTTCAACCATCCACCTCAACAAATTCACTTACTGATGAAGCCGTGGAAGAAATAATGAGGCCTAACTGGCCTGCAGGAGAGCAGCTTATCTCTGAAGCATGTATTGATCATCATAACGGATGGCTCATCAGTGGATCACAGAATGATGCATTTGCATTCTCCTTTACCCCTCCTACTTCCCCATGGGAGCAGCAAGCAGGGTCTTTCTACAATCCATTTGATTGTGGAGCAGAATCTAGCAAACCTGTGCATACAACAACCAAAGGGAGAGCCAAGACAGTCTGGGGAAAGATTCGAACATTTGCAAATGTTCTCAAATGGTTTGCAGTTCAAAGGAAGGCAAAAGTTTTTCACTATCAGGATTGA 1512 0.4385 MIPPILEEVIPPMLQRYVSPRCGLPLNRQQIGPSGGRALQLCFMNRLPSTIFTGRKIRAEDGSKLQIALCDATFQHPRVKEDASSMKVQICVLDGDFGCNGSEDWTAEDFNANILVPRKDKPPLLNGDKVVTLKNGVGYVENIVFTDPSCWTKSKMFRLGLKVWQSTSNGVGIKGGRSEPLRVKDKRGEVYKKHDKPSLDDKVWRLKRIRQNGEIDRKLSSLGITTVKNLLRWYTIDKASLLQGIGGIPGTSWDKIIEHANACEKDDHERYIYQGFAAEQSVSLVFNCIYKVSEVSFDGQNYCSLESLNLKEKSLVEIVKQQAYSNLNDLKPYEPAPHSLLTLATMHRGAPDQGLQQFYHPIAPQCPFSNNLTGQQQTWPNLFQPSTSTNSLTDEAVEEIMRPNWPAGEQLISEACIDHHNGWLISGSQNDAFAFSFTPPTSPWEQQAGSFYNPFDCGAESSKPVHTTTKGRAKTVWGKIRTFANVLKWFAVQRKAKVFHYQD* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3316 503 Pfam Calmodulin binding protein-like N-terminal domain 39 186 IPR046831 -
Dod01g3316 503 PANTHER CALMODULIN-BINDING PROTEIN 27 490 - -
Dod01g3316 503 PANTHER OS02G0177800 PROTEIN 27 490 IPR012416 GO:0005516
Dod01g3316 503 Pfam Calmodulin binding protein central domain 198 263 IPR046830 -
Dod01g3316 503 Pfam Calmodulin binding protein C-terminal domain 270 333 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3316 Dod-Chr1 74231143 74233666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3316 1 330 Calmodulin-binding Proteins AT5G26920 40.964 4.89e-68 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3316 - - lja:Lj1g3v4083120.1 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3316 01 74231143 74233666 Dod01g3316 01 74231143 74233666 ECH