Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3302 ATGGTTTGCCAGGAAGAGCAGTTGATTGAACAAGTCTGCGAGCTGTATGAACAAATCTCGAGCCTAGAGAGTCTCAAACCCTGCAAACATGTCGACATGCTATTCACAAAGCTGGTCCTCACATGCATGCCACCTAGCCCAATCGATGTTACCAAGCTCAGAAAGAATGTGCAAGAGACAAGAACACGCCTTATAAGGCTGTGTGGTGTAGCCGAGGGACATTTGGAGACCCATTACTCAACAATCCTAGGCTCCTATGACAACCCCCTTGATAATCTCCATATTTTCCCTTACTATAACAACTACCTCAAGCTTGGTCTCCTTGAGTTCACCATCCTTACCCAACACTGCACTCATGCCCCTAGCAAAATTGCCTTTGTGGGTTCAGGGCCCCTCCCTCTTACCTCAATTGTATTGGCATCAAACCACTTACCCTCCTCCACTTTCCACAACTATGACATAGACCCTTTGGCCAATTCCAATGCCATGCGCTTGGTTTCCTCTGACCCTGACTTGTCCAAGCGCATGGTTTTCCACACCAATGATATATTGGATGTGTCAAGCGATTTGGAAGACTATGAGGTTGTTTACTTGGCAGCCCTTGTGGGAATGGACAAGGAGGAGAAGAAGCGAGTCATTGATCATTTGGCTAAGTGCATGGCCCCTGGTGCCCTTCTCATGCTAAGGAGTGCTCATGGTGCTCGTGCTTTTCTCTACCCTGTGGTTGAGCCTTGTGATCTTAGAGGCTTTGAGGTCCTCTCTGTGTTCCACCCCACGGATGAGGTTATCAACTCAGTTGTCATAGCACGTAAATATCCCGTGGCTATGCCTATTCACTCACTTGACCAAGGCCTCGCTGGTTCTATGATACTGCCAAACAAGTGTTCTGAGATCCAAGTCTTCAACCCCCTCATCAATCATGGGAACATGATTGAGGAATTGACCGTTGAGGAGCAACTCTCCTAA 966 0.4772 MVCQEEQLIEQVCELYEQISSLESLKPCKHVDMLFTKLVLTCMPPSPIDVTKLRKNVQETRTRLIRLCGVAEGHLETHYSTILGSYDNPLDNLHIFPYYNNYLKLGLLEFTILTQHCTHAPSKIAFVGSGPLPLTSIVLASNHLPSSTFHNYDIDPLANSNAMRLVSSDPDLSKRMVFHTNDILDVSSDLEDYEVVYLAALVGMDKEEKKRVIDHLAKCMAPGALLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVINSVVIARKYPVAMPIHSLDQGLAGSMILPNKCSEIQVFNPLINHGNMIEELTVEEQLS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3302 321 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Dod01g3302 321 PANTHER NICOTIANAMINE SYNTHASE 3 1 320 IPR004298 GO:0030410|GO:0030418
Dod01g3302 321 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Dod01g3302 321 PANTHER SYNTHASE, PUTATIVE-RELATED 1 320 - -
Dod01g3302 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 273 IPR029063 -
Dod01g3302 321 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3302 Dod-Chr1 74085168 74086575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3302 1 321 Nicotianamine Synthase Gene Family AT1G09240 61.846 3.47e-136 387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3302 01 74085168 74086575 Dod01g3302 01 74085168 74086575 ECH