Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3287 ATGGGGAGGGACCTCCTTCCATTGCTCTCAATGATTCTAGTGCAGTTGGCCTATTCAGGGATGAGTATTACCTCAAAGCTTGCAATACAAGCTGGCATGAACCCCTTTGTCCTCGTTGCTTATCGCCAAATCTTTGCGACTATAGCCATTGCTCCCTTCACTTATTGGCTAGAACGGAAAACAGTTCCCAGGATGACAAAGCGCGTTATGATCCAGATAGTATTATCTTCTTTAACAGGAATAACAGCAAACCAGGTTCTGTTCTTCGTGGGGCTAAAATATTCAACCGCTACGATTGCGAGTGCACTGATGAACTTGCTCCCAGCTTTTACATTTGTCCTCGCAGCCATCTTCAGACAAGAGAATGTGGGAATAAAGAAGAGGGCCGGGCAAGCAAAGGTGTTGGGAACAGCTGTGTGTGTGGGTGGAGCCCTGCTTTTATCATTTTACCACGGAAAAACACTTGGTTTACGAGAATCAAGCATTCACTGGAGATATGCTGACAAAATTGAAGGAGCAAGCTCCTCCGCCGAAACAAACGTGCTTCTGGGCCCTTTCCTCTTAGTTGCTAGTGGCCTTGTTTGGGCTGTATGGTTCGTGATTCAAGCAGATATGAGCCGGAACTTTCCAGCTCCTTATACGAGCACCACCTACATGTGTTTCTTGGCAAGCATTCAGTGTGTGGCCATTGCCTTGTGTTTTGAACACAGGGCCTCAGCTTGGTCACTTCGCGATGCTATGAGACTTGCCTCTTCTCTTTATGCGGGAGTAGTTTGCACTGGTCTAGCGTATTCCCTCTTTTCATGGACCATTGCAAGAAAAGGCCCTTTGTATGGGTCAGTATTTAGCCCATTGCAGCTTGTCATCACTGCTGTTCTAAGCTGGGCTTTGCTTCGGGAGAAGTTATACGTTGGAACTGTGATAGGGTCTGTGCTGATAGTTTGCGGGCTGTATTCTGTTCTGTGGGGAAAGAAGAAAGAGATGAATGAGATTGAGGGAGGCGCTATAGAAGAGGGGGTCACAGAAACAATCATGAGGGGCAAGGAAAGTGGTGCAAAGAATGACCTGGAATTAAAATCTTACATGCCAATGCCATCCAACCGTAACAACCATCATGTTGTCGTTACTAATTAA 1134 0.4638 MGRDLLPLLSMILVQLAYSGMSITSKLAIQAGMNPFVLVAYRQIFATIAIAPFTYWLERKTVPRMTKRVMIQIVLSSLTGITANQVLFFVGLKYSTATIASALMNLLPAFTFVLAAIFRQENVGIKKRAGQAKVLGTAVCVGGALLLSFYHGKTLGLRESSIHWRYADKIEGASSSAETNVLLGPFLLVASGLVWAVWFVIQADMSRNFPAPYTSTTYMCFLASIQCVAIALCFEHRASAWSLRDAMRLASSLYAGVVCTGLAYSLFSWTIARKGPLYGSVFSPLQLVITAVLSWALLREKLYVGTVIGSVLIVCGLYSVLWGKKKEMNEIEGGAIEEGVTETIMRGKESGAKNDLELKSYMPMPSNRNNHHVVVTN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3287 377 PANTHER WAT1-RELATED PROTEIN 6 333 - -
Dod01g3287 377 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Dod01g3287 377 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020|GO:0016021
Dod01g3287 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Dod01g3287 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 326 - -
Dod01g3287 377 PANTHER WAT1-RELATED PROTEIN 6 333 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3287 Dod-Chr1 73875253 73879990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3287 4 370 Nodulin-like Gene Family AT1G09380 55.978 4.70e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3287 - - gmx:100801512 513.072