Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3280 ATGGCGTCCATTGGTGTGGCACCAACATCAGGCTTGAGAGAATCCGGTGGTGGTGTTGATGGATTGCCAGAAGAGATGAACGACATGAAAATTAGGGATGATAAAGAAATGGAAGCTACGGTTGTTGATGGTAATGGAACTGAGACAGGACATATCATTGTAACTACCATTGGGGGCAGAAATAGTCAGCCAAAGCAGACTATAAGATACATGGCAGAGCGGGTTGTTGGGCATGGATCATTTGGGGTTGTCTTCCAGGCCAAATGCTTGGACACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAGAGGTATAAGAACCGGGAGCTGCAGACAATGCGTCTTCTTGACCACCCAAATGTTGTCTCTTTGAAGCATTGCTTCTTTTCAACCACTGAAAAGGATGAATTATACCTTAATTTGGTACTTGAGTACGTACCTGAAACAATTCATCGTGTGATCAAACATTACAACCTCAAGTTGAATCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTTTGTCATCGGGATATCAAGCCTCAAAATATATTAGTCAATCCACATACCCACCAGGTTAAATTATGTGACTTCGGAAGTGCAAAAGTCTTGTTAGATGCCCTGATCCATCCTTTCTTTGATGAACTTCGTGACCCAAACACCCGCTTGCCAAATGGTCGATTCCTTCCACCGTTATTCAATTTCAAATATCATGAACTGAAGGAGGTCCCAGTTGAGATTTTGGTGAAATTGATTCCAGAGCATGCGAGGAAGCAGTGCCCCATTCTTGGCTTGTGA 852 0.4261 MASIGVAPTSGLRESGGGVDGLPEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNSQPKQTIRYMAERVVGHGSFGVVFQAKCLDTGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETIHRVIKHYNLKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNILVNPHTHQVKLCDFGSAKVLLDALIHPFFDELRDPNTRLPNGRFLPPLFNFKYHELKEVPVEILVKLIPEHARKQCPILGL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3280 283 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 223 280 - -
Dod01g3280 283 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 223 - -
Dod01g3280 283 MobiDBLite consensus disorder prediction 1 25 - -
Dod01g3280 283 ProSiteProfiles Protein kinase domain profile. 70 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3280 283 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 223 280 - -
Dod01g3280 283 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 223 - -
Dod01g3280 283 SMART serkin_6 70 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3280 283 SUPERFAMILY Protein kinase-like (PK-like) 69 225 IPR011009 -
Dod01g3280 283 Pfam Protein kinase domain 70 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3280 283 Gene3D Transferase(Phosphotransferase) domain 1 150 224 - -
Dod01g3280 283 ProSitePatterns Protein kinases ATP-binding region signature. 76 100 IPR017441 GO:0005524
Dod01g3280 283 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Dod01g3280 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3280 Dod-Chr1 73831072 73834525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3280 69 224 MAP Kinase Gene Family AT5G19010 37.654 3.95e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod01g3280 Pkinase 2.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3280 K00924 - twl:119999950 425.631