Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3276 ATGGGTGGCAATCTTAATGCTGAATTATCCAAGGAAACTCCCATTTTTGGCCTTAAGGTTTGGGAAATAGTGGGAATTGCCGTTGGATTGTCTATTATTATCATCCTCTCTTTGCTCTCACTTTGCCTTACCTCGAGGAAGAAATCTAGAAAAGCTAAGGATAAGATTCCTATTAGTCAGATACCGACAATCTCAAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCAACAAATGGATTTGCTCCCCGTGAGGGGATACTTCTTACAATTCATGACAAATCCAGTGACAAAGATTCAGACAAAGTCATGGTTCATTTAGGTGTGGGGACGATGAGGAATGGGGATAACAGCAGTCAATCAGGGTCATTTCATCACATCGAGAAAGATGGAGGAGGGTCATACTCAGGAGAAGATGGTAGCTCTGGAACTGTTACAGTGCACAAGCACTCTTCTCACCCTATAACAGCTCCTTCACCACTGACTGGCCTTCCGGAGTTCTCTCACTTGGGCTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCTACAAACCGTTTTTCCAAAGACAATGTCATTGGTGAAGGTGGTTATGGAGTTGTTTATCGAGGACAGTTGATCAATGGGACTCCAGTGGCGGTTAAAAAGATACTCAACAACATTGGTCAGGCTGAGAAAGAATTTAGAGTGGAGGTTGAAGCCATTGGCCATGTGCGCCACAAAAATTTGGTTCGCCTTTTGGGGTACTGCATTGAGGGGACTCACAGGATGTTAGTCTATGAGTATGTAAATAATGGAAATTTGGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGATATCTTACATGGGAAGCACGTATCAAGATTCTCCTTGGCACGGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCGAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGATGACGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCTAAGTTATTGGGTGCTGGAAAAAGTCATGTCACCACACGAGTTATGGGGACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAAAAGAGTGATGTGTACAGCTTTGGTGTTTTGCTACTAGAAGGAATTACTGGAAGAGATCCAGTAGACTATGGTCGTCCAACACAAGAAGTGAATCTTGTTGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCAGAAGAAGTGGTGGATCCAAACATTGAGGTGAAGCCATCAACCAGAGCTTTAAAACGTGCTCTCTTAACTGCTCTAAGATGCGTAGATCCAGATTCTGAGAAAAGGCCAAGGATGAGCCAAGTTGTACGTATGCTGGAGTCAGAGGAATATCCTTTGGCAAGAGAGGACCGTAGGCACCGAAGAAACCGAGGTGGAAGTGGAGAAATTGAATCCCAGAAGGAATATTCTGACACTGACAAGAGTGAGATTCAAGGTTCCAGTTAA 1506 0.4396 MGGNLNAELSKETPIFGLKVWEIVGIAVGLSIIIILSLLSLCLTSRKKSRKAKDKIPISQIPTISKEIKEVRVEQVSTNGFAPREGILLTIHDKSSDKDSDKVMVHLGVGTMRNGDNSSQSGSFHHIEKDGGGSYSGEDGSSGTVTVHKHSSHPITAPSPLTGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTQEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPRMSQVVRMLESEEYPLAREDRRHRRNRGGSGEIESQKEYSDTDKSEIQGSS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3276 501 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Dod01g3276 501 Gene3D Transferase(Phosphotransferase) domain 1 264 475 - -
Dod01g3276 501 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Dod01g3276 501 MobiDBLite consensus disorder prediction 461 501 - -
Dod01g3276 501 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 498 - -
Dod01g3276 501 MobiDBLite consensus disorder prediction 112 160 - -
Dod01g3276 501 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3276 501 MobiDBLite consensus disorder prediction 461 494 - -
Dod01g3276 501 SUPERFAMILY Protein kinase-like (PK-like) 172 464 IPR011009 -
Dod01g3276 501 MobiDBLite consensus disorder prediction 137 158 - -
Dod01g3276 501 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3276 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Dod01g3276 501 PANTHER OS01G0323000 PROTEIN 3 498 - -
Dod01g3276 501 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3276 501 CDD STKc_IRAK 194 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3276 Dod-Chr1 73794820 73800045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3276 165 462 Trihelix Transcription Factor Family AT1G70460 50.495 2.43e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod01g3276 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3276 - - gmx:100787014 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3276 01 73794820 73800045 Dod01g3276 01 73794820 73800045 ECH
Dod01g3276 01 73794820 73800045 Dod08g0871 08 10585042 10592009 PCT