Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3272 ATGGGCGGAGGTGGAGGAGCGACGCCGAACGCGGAGGCGCAGTACTCGACGGCGAAGACATCTGTGTGGTGGGACATCGAGAACTGCCACGTCCCCAAAGGGTGTGATCCGCACGCCATCGCTCAGAATATAAGCTCTGCGCTGGTTCGCATGAACTACTGTGGTCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCCCCGCCTCTGTACAGCACGCTCTCTCCAGCACCGGCATCTCCCTCAACCACGTCCCTGCTGGTGTTAAAGATGCCAGTGACAAGAAGATTCTTGTGGACATGCTGTTCTGGGCAGTGGACAATCCTGCGCCTGCTAATTATTTATTGATTTCCGGGGACAGAGACTTCTCTAACGCTCTCCATCAACTGCGGATGAGAAGATATAATATTCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCTTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTTTTAGCTGGAGGACCTCCTCTTACTAATGGTGAATCGCAACAACTTGGTAATAGTAGCCACGTAACAAGTTCCGACACGTTACCGACTCCAGTCACTAGTGCTGCTCAGACACAGCCACAGATGGATTCCTATGCTGAAGTTCATGTAGGGAATCTTAAGTTTCCGAATGCAGGAAGGGGATATCAAGGGAAAACAAATTGGAGAAACCCAGGTCAACCAAATGGACCCAAAACCATGAACCCACCACCGGTTGGACATCAAGATAATCGTAATAATGTAAACTCTTACCGACCTGGCAACTTTAATCCAAATATTCCTCCAAGTGCACCTGCTACAAATTTTCTTCGAGGCAATACTGATCAATTATGGAGCAATAATGGTAATCTACAGGGCAATCACCAAACTCCTTATTCACAGCCTTTAAGACCACCTAACAGTTTTCCGATTCAACCTCCTTTTGCACCGAGTAATAATTATCCTCCAAATTCCCATACTTTTGCAACTTCACCAGCGCCATCTAGGCCTGGTGGTCCCAGCTTCACTGCATCACCACTTCCAAATGTGCCAGATATTGGTAATCTGAACATTTCTGGGTATCCCAATAATGTTCATAATCCACGTCCCATTAAGCAACGCAGTGGAGAGTCGAAACAGAATCCTAAAAGTAATGCTCCACTTCCCATAACATCAACTGATGAACAAAATGGACATATGGTGCATAGCAGTAGCACACAACATTTACACCAAGGCTATCCACATGGACATGGTCCAGAGTATCAACCGACACCACCGACTGCAATGGGTAATAATAACCTTCCTGGTAATGGAATGTGGGGATCTCCAGGGTGCCCTAAACCTTCTGAATATGTCCAAGGCCTTATAGGAGTTGTTTTACTTGCCTTGAATTCACTGAAAAATGAAAAGATTATGCCAACAGAGGCAAATATAACTGATTCTATCCGTTATGGAGATCCCAGGCACCGCAACACTGATGTTAAGAAGGCTTTGGAGAGCGCCATTGAGCAGCAGATGGTGGTGAAACAGAATTTAGGTGTTCTGCAGCTGTATGTTGGTAAGAATGATAAACTATGGAAGTGTGTAAATCCTATAGGTGGTAATCCTAAGCAGCACTCAAAAGAAACTTGGGATGAAATTCAAAAGTTTTTAGCAACTTCTTCTGGAAGATCAGCAATACTGGGTACACAGTGCAAGTATGAAGCAGGTATTGTCATAAAGAATATGTGCTTAAAAGATCTTGCTTTGGGTGATGTCCTTCAGATATTGAACATGTTGGTTACTCATAAAAAATGGATTGTGCATCATCAGTCTGGTTGGCAACCACTTAACATTACTCTTCCTGAGACAAACCCTGATTCAGGGGTTCTAGCAAGCCCATAA 1887 0.4542 MGGGGGATPNAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNSSHVTSSDTLPTPVTSAAQTQPQMDSYAEVHVGNLKFPNAGRGYQGKTNWRNPGQPNGPKTMNPPPVGHQDNRNNVNSYRPGNFNPNIPPSAPATNFLRGNTDQLWSNNGNLQGNHQTPYSQPLRPPNSFPIQPPFAPSNNYPPNSHTFATSPAPSRPGGPSFTASPLPNVPDIGNLNISGYPNNVHNPRPIKQRSGESKQNPKSNAPLPITSTDEQNGHMVHSSSTQHLHQGYPHGHGPEYQPTPPTAMGNNNLPGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNEKIMPTEANITDSIRYGDPRHRNTDVKKALESAIEQQMVVKQNLGVLQLYVGKNDKLWKCVNPIGGNPKQHSKETWDEIQKFLATSSGRSAILGTQCKYEAGIVIKNMCLKDLALGDVLQILNMLVTHKKWIVHHQSGWQPLNITLPETNPDSGVLASP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3272 628 MobiDBLite consensus disorder prediction 171 201 - -
Dod01g3272 628 Pfam NYN domain 19 155 IPR021139 GO:0004540
Dod01g3272 628 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 613 - -
Dod01g3272 628 PANTHER LIMKAIN B LKAP 2 613 IPR024768 GO:0005777|GO:0010468|GO:1903231
Dod01g3272 628 MobiDBLite consensus disorder prediction 349 412 - -
Dod01g3272 628 Gene3D - 10 162 - -
Dod01g3272 628 MobiDBLite consensus disorder prediction 322 339 - -
Dod01g3272 628 MobiDBLite consensus disorder prediction 218 436 - -
Dod01g3272 628 CDD PIN_limkain_b1_N_like 19 143 - -
Dod01g3272 628 MobiDBLite consensus disorder prediction 247 303 - -
Dod01g3272 628 MobiDBLite consensus disorder prediction 304 321 - -
Dod01g3272 628 Pfam OST-HTH Associated domain 565 614 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3272 Dod-Chr1 73748950 73753328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3272 11 202 C2H2 Transcription Factor Family AT5G61190 71.282 3.65e-85 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3272 - - gmx:100794608 1084.71