Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3257 ATGGCGAAGCAGCATTTTTGGGTTGGCATTGCAATAGGACTTGTTTTTAGCAACTGGGTTGATGGGTTTGCAGGACATGAATATGAATATGATCACTTCAATGAAACAGAGCTGTCCCTATTAGAGGCTCATGAACTTGAAGCATCCTTATCTTTGGCTGGGGCTGGGAGGAATCCTCTGCTCGTAGGGCTCACCCTTATTCAAACTGCTGCTGCTAAAGGAGCAGTCTGCTTGGATGGAACATTACCTGGTTATCATTTGCATAGGGGATATGGATCAGGGGCAAACAGCTGGCTTATTAATTTAGAGGGAGGAGGATGGTGTAATAATATTAGAACATGTGTTTATCGCAAGAAAACACGGCGCGGATCATCAACATTCATGGAAAAGGAGATACCTTTCATAGGAATACTCAGCAATAAACGTGAAGAAAATCCAGATTTTTTCAATTGGAACAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTGCTGGTGATGGTGAAGATAAGGCTGCACAACTGCAATTCAGAGGGCAGCGTATTTGGACAGCTGCGATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAGGCAGGCTCTTCTTTCAGGATGCTCTGCTGGTGGCCTTGCTACTATTATACATTGTGATGAGTTTCGTGGTCTCTTTCCAAGGACCACCAAAGTAAAGTGTCTAAGTGATGCTGGGTTGTTTCTTGATGCGATTGACGTATCTGGTGGGCATACCCTCAGGAATTTATACACTGGTGTCGTAGGATTGCAGGGAGCACAGAAGAATCTGCCACAAATTTGTACCAATCACCTTGATCCTACTTCGTGCTTCTTCCCTCAGAACTTGATTTCCAGTGTTAGAACCCCGCTATTTATTCTTAATGCTGCTTATGATTCATGGCAGATTCAGTCCAGTTTAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCACGATTGCAGATTAAACCATGCCAAATGTACTAGACCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGCTGAACGCTATCAAAGACTTCTCAAGACCAAAGCAGAATGGATTGTTTATTAATTCATGTTTTTCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCCTCAGGAACAAGGCTATTGCTGTGGCTGTGGGGGACTGGTATTTCGACCGAGCAGGTGTTAAGGTCATTGATTGTCCTTACCCTTGTGATCATACGTGTCACAATCTGATATTCAGATGA 1278 0.4382 MAKQHFWVGIAIGLVFSNWVDGFAGHEYEYDHFNETELSLLEAHELEASLSLAGAGRNPLLVGLTLIQTAAAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRTCVYRKKTRRGSSTFMEKEIPFIGILSNKREENPDFFNWNRVKLRYCDGASFAGDGEDKAAQLQFRGQRIWTAAMEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDAIDVSGGHTLRNLYTGVVGLQGAQKNLPQICTNHLDPTSCFFPQNLISSVRTPLFILNAAYDSWQIQSSLAPPSADPHGYWHDCRLNHAKCTRPQIQFLQGFRNHMLNAIKDFSRPKQNGLFINSCFSHCQSERQDTWFADNSPVLRNKAIAVAVGDWYFDRAGVKVIDCPYPCDHTCHNLIFR* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3257 425 PANTHER NOTUM-RELATED 4 424 IPR004963 GO:0016787
Dod01g3257 425 PANTHER PECTIN ACETYLESTERASE 4 424 - -
Dod01g3257 425 Pfam Pectinacetylesterase 59 404 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3257 Dod-Chr1 73614544 73619909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3257 61 425 Carbohydrate Esterase AT1G57590 75.342 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3257 K19882 - gmx:100782401 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3257 01 73614544 73619909 Dod01g3234 01 73335703 73340577 ECH
Dod01g3257 01 73614544 73619909 Dod06g1923 06 28195820 28200724 ECH
Dod01g3257 01 73614544 73619909 Dod01g3257 01 73614544 73619909 ECH
Dod01g3257 01 73614544 73619909 Dod06g1898 06 27651142 27657072 PCT