Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3236 ATGTCGGCTTCATCATTCTCATTCTCAACGCAGTTGCTTCGCTCTCACAACAAGTACCCACTTCTTCCACCTTTTCCCCATCTCCAGGGTAATTTTAGCCCAGATGCGTCTAAGGTTGGAAGGCCTCATATGCTCTGTAGCAGTAGCAGGTCACAGCTTGGTTACAATAAAGCTTTGACATCAAGATCACATTATGCATTGAGGTTTTCTGTTGCACAACAATCTGGCACAAAATCAATCAGATATAGGAGAATGGCATGTTTCAATTCTACAGAAAACAATGTTCTAGAGCTGCAAGCCAAGGTGACAAACAAGTGTTTCTTTGATGTAGAAGTTGGAGGTGAACCTGTGGGCAGGATTGTCTTGGGACTATTTGGAGAGGTTGTTCCAAAAACAGTTGAGAATTTCCAGTGCATTATGTACTTGAACAATCTTTGTGCAGGAGAGAAAGGATATGGGTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAGTTCATGATTCAGGGAGGGGACTTTACTGAAGGAGATGGAACTGGTGGAACTAGTATCTATGGTCCCAGTTTTAAAGATGAGAGTTTTGCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCTGGTCCTAACACCAATGGTAGTCAATTTTTCATTTGCACTGTGAAGACTGCATGGCTGGACAATCGCCATGTTGTGTTTGGACATGTCATTGATGGAATGGATGTTGTGAGGATACTTGAATCCCAAGAGACAAGCAGAATGGATATCCCTCGGAAGCCTTGCAGAATTGTTAATTGTGGTGAACTGCCTATAGATGGTTGA 828 0.4275 MSASSFSFSTQLLRSHNKYPLLPPFPHLQGNFSPDASKVGRPHMLCSSSRSQLGYNKALTSRSHYALRFSVAQQSGTKSIRYRRMACFNSTENNVLELQAKVTNKCFFDVEVGGEPVGRIVLGLFGEVVPKTVENFQCIMYLNNLCAGEKGYGYKGCSFHRIIKEFMIQGGDFTEGDGTGGTSIYGPSFKDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTAWLDNRHVVFGHVIDGMDVVRILESQETSRMDIPRKPCRIVNCGELPIDG* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3236 275 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 229 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 159 171 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 230 245 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 202 217 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 108 269 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 274 - -
Dod01g3236 275 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 59 274 - -
Dod01g3236 275 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 154 171 IPR020892 GO:0003755|GO:0006457
Dod01g3236 275 SUPERFAMILY Cyclophilin-like 100 271 IPR029000 -
Dod01g3236 275 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 107 270 IPR002130 GO:0000413|GO:0003755
Dod01g3236 275 Gene3D - 90 274 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3236 Dod-Chr1 73356582 73359574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3236 118 268 U-box Gene Family AT5G67530 42.763 2.18e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3236 K03768 - gmx:100785805 403.675