Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3234 ATGAAGCTGTTTCCGGTGGCTCTTGCCTTCGTCTCTGTGGCCATAATATCCACCACTGGATCTGAAAATGAGACAGAGACACGCTTTCAGTTTCAGGCTGAACTGTCATTCTTTGAAAACGATGCCGTCTCGCACTCACACTCAACAAAGGCTTCAACCTCGCCCCAACAACCTCAACCTCTCATGGTCCCTCTCACTCTTATTCAAGGAGCTGCTTCCAAAGGAGCTGTCTGTTTGGATGGAACATTGCCAGGTTACCACTTTCATCCTGGGTTTGAATCAGGTGCAAATAGTTGGCTGATTCAATTAGAGGGAGGAGGATGGTGTATTTCCGTCAGTAACTGTGTCTTCAGAAAAACTACACGTCGCGGTTCCTCTAAATACATGGAAAAGCAAATACCATTCACAGGGATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTCAAAGTACGATACTGTGATGGGGCATCTTTTAGTGGAGACGGTCAATACGAGGCTAAACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAGTTAATGTCCAAGGGAATGCAGAAAGCCAACCAGGCATTTTTGTCTGGATGCTCTGCAGGTGGTGTGGCATCTATAATACATTGTGATGAGTTCCGGAGCTTGTTTCCAAAATCTACCAAAGTCAAATGTTTGAGTGATGCTGGATTTTTTCTTGATGCAGTTGATGTATCTGGGGGGCACACACTGAGGAATATGTTTGGAGGTGTAGTTACCTTGCAGAATGTGCAAAAAAATCTGCCACAAAGTTGCCTTAACCAAATGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGATCAAGCATGTTGAAACTCCATTATTTCTTCTCAATGCAGCTTATGATGCATGGCAGCTCCAAGAGAGTTTAGCCCCACATTCGGCTGATCCAAGTGGCTCTTGGAATGAATGTAAATCAAATCACGCAAAGTGTAACTCATCTCAGATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTAAATGATGTAAAAGACTTCTCAAGGTCATCTCAAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAAAGACAAGATACATGGTTTGCTGATGACTCTCCACTTATTAACAACATGCCAGTGGCAATTGCTGTTGGAGACTGGTATTTTGATAGGCAAACTGTGAAAGCTATTGACTGTGCTTACCCCTGTGACAACACCTGCCATAATCTGGTCTTCAAGTGA 1281 0.4301 MKLFPVALAFVSVAIISTTGSENETETRFQFQAELSFFENDAVSHSHSTKASTSPQQPQPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFESGANSWLIQLEGGGWCISVSNCVFRKTTRRGSSKYMEKQIPFTGILSNKPEENPDFFNWNRVKVRYCDGASFSGDGQYEAKQLQFRGQKIWLAAMEELMSKGMQKANQAFLSGCSAGGVASIIHCDEFRSLFPKSTKVKCLSDAGFFLDAVDVSGGHTLRNMFGGVVTLQNVQKNLPQSCLNQMDPTSCFFPQNLIKHVETPLFLLNAAYDAWQLQESLAPHSADPSGSWNECKSNHAKCNSSQIQFLQDFRNQMLNDVKDFSRSSQTGLFINSCFAHCQSERQDTWFADDSPLINNMPVAIAVGDWYFDRQTVKAIDCAYPCDNTCHNLVFK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3234 426 PANTHER NOTUM-RELATED 36 425 IPR004963 GO:0016787
Dod01g3234 426 PANTHER PECTIN ACETYLESTERASE 36 425 - -
Dod01g3234 426 Pfam Pectinacetylesterase 57 406 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3234 Dod-Chr1 73335703 73340577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3234 40 426 Carbohydrate Esterase AT2G46930 71.318 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3234 K19882 - gmx:100785270 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3234 01 73335703 73340577 Dod06g1923 06 28195820 28200724 ECH
Dod01g3257 01 73614544 73619909 Dod01g3234 01 73335703 73340577 ECH
Dod06g1923 06 28195820 28200724 Dod01g3234 01 73335703 73340577 ECH
Dod05g2481 05 51106641 51112199 Dod01g3234 01 73335703 73340577 ECH
Dod01g3234 01 73335703 73340577 Dod01g3234 01 73335703 73340577 ECH
Dod01g3234 01 73335703 73340577 Dod06g1923 06 28195820 28200724 PCT