Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3221 ATGAGATTTTTAGACATAAAAAGATGGAAATCGTTTCATTTTGCAGAGGTGTTTTGCTGGATGGTCACAGGGGAGAGACAGGCTGCAAGAATAAGGGGCTTGTATTTGAAAACTATATTGAGACAAGATATTGCTTTCTTTGATAAGGAAACTAACACTGGAGAGGTGATTGGGAGAATGTCTGGTGACACTGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAGTTTGTGCAGCTCATAGCAACATTCGTTGGGGGGTATGTGATATCATTTGTCAAAGGGTGGCTTCTTAGTCTTGTCATGTTGTCCTCTCTTCCTCTCCTTGCTTTGTCCGGCGCTGCTTTCGCCATGGTTGTAGAAAGAACGGCATCCAAAGGCCAAAACGCTTATGCAAAAGCTGCACATGTAGTTGAACAAACAATTGGCTCTATACGAACTGTTGCATCCTTCACTGGGGAAAAGCAAGCAGTATGTAATTACAAAAAATTTCTTGGAGATGCTTACAAATCAGGAGTTCGTGAAGGCATCGCATCTGGGTTTGGTTTTGGTCTAGTTACGTTAATTATCTTCTGTGGTTATGCTTTGGCTGTGTGGTTTGGTGCAAAGATGATAATCGAAAAAGGATATGACGGTGGTACGGTAATCAATGTGATGGTTGCTATCTTAACTGCTTCCATGTCTGTTGGTGAGGCTAGTACTTCCATAAGTGCTTTTGCTGCGGGTCAAGCAGCAGCATACAAAATGTTTCAAACAATTGAGAGGAAGCCAGAGATAGATTCCCATGATCCAAGTGGAAAAACATTAGAGGATATGCATGGTGAGATAGAATTAAGGGATGTTTATTTTAGTTATCCAGCCAGACCTGAGGAGCTGATATTTAATGGATTCTCTCTTCACATACCAAGTGGCACCACTACAGCTTTAGTGGGACAAAGTGGAAGTGGCAAGTCCACAGTTATTAGTCTGATAGAAAGGTTCTATGATCCCCAAGCAGGTGACGTTCTTATTGATGGCATTAACATCAAAGAGCTTCAGCTTAGATGGATCAGAGGAAAAGTTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAAGAAGGAGCAACAGCTGAAGAGATAAGAGTTGCTGCTGAACTTGCAAATGCTGCTAAATTCATTGATAAACTGCCACAGGGGTCCGACACAATGGTTGGTGAGCACGGAACTCAGCTATCCGGTGGACAGAAGCAGCGCATTGCCATTGCTAGAGCTATCTTGAAAGATCCAAGGATTCTACTTCTAGATGAAGCAACAAGTGCACTTGATGCAGAGTCTGAAAGGATAGTACAAGAGGCTCTTGATAGGATCATGGTCAATAGAACTACTGTTGTCGTGGCACATCGCTTGAGCACGGTGAGGAATGCTGACATAATCGCTGTAATTCATAGAGGGAAAATGGTTGAGAAAGGAACACATGTAGAATTACTAAAGGATCTTGAAGGAGCTTACGCACAACTTGTACGTTTACAAGAAGTGAAAAAAGAATCAATAGAGAATGAAGACAATCAAAATAGAAGTGAACTCTCCTCAGAATCCCTTAGGAAGTCAAGAAGTCAAGGGAGGTCTCTCAGAAGATCAGGGTCATCGGTGGGGAGCAGTAGCCACCACTCATTCTCGATTCCCTTTGGCATACCCACAGGAGTCAACGTCCCTGCTGATCCTGAACTTGAAGGTCCACAGGAGTATGAACAACGCTCACCGGAGGTTCCACTTAAGCGCCTCGCTACCCTCAACAAGCCAGAGATTCCAGTGCTTTTGATGGGGTGTGTAGCTGCCATAACAAATGGTGCTATATTTCCAATATTTGGTGTATTGCTTTCTAGTGTCATCAAAACATTCTATGAACCATTCCATGAGATGAAAAAGGACTCTAGGTTTTGGGCACTGATGTTTGTTTCCCTTGGACTTGTATCTTTTATTGCAATTCCAGCCCGTGGGTACTTTTTCTCTATGGCTGGCAGCAAGCTAATCCAACGTATTAGGTTGATTTGTTTTGAGAAGGTGATCAACATGGAGGTTGGCTGGTTTGATGAGGTTAACCACTCGAGTGGCGCAATCGGTTCAAGGCTCTCAACAGATGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCACTAGGACTACTCGTTCAAAATATAGCAACAGCATTGGCTGGTCTGATCATTGCTTTTGTTGCAAGCTGGGAGTTGGCTTTGGTTATTCTTGTGTTAATTCCCATGATTGGAATGAATGGATATATTCAAATAAGATTCTTGAAGGGATTCAGTGCAGATGCAAAGAGGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTGGCCTCTTTTTGTGCTGAAGAGAAGGTTATGGAACTATACAAGCAGAAATGTGAAAGTCCTATGAAAACAGGAAAACGACTAGGCTTGATTAGTGGAATAGGATTTGGGGTCTCATTTTTCCTACTTTATAGTGTCTATGCAACTTGTTTCTATGCTGGAGCCAGATTTGTGAAGGCTGACAAAGCAACATTCTCAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCTGCTCTTGGAATTTCTCAATCAAGCTCACTAGCTCCTGATTCTAGCAAAGCCAAGTCAGCTGCTGCTTCCATATTTGGACTAATTGATAGGAAGTCAAAGATAGATCCAAGTGATGAGTCTGGTAGAACACTGGACAATGTAAAAGGTGAAATTGAGTTTCGTCATGTGAGCTTTAGGTATCCATCTAGGTCAGACATACAAATTTTCCAAGACCTTAGCTTGACCATCCATTCTGGAAAGACGGTGGCTCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTTCATTGTTACAAAGATTTTATGATCATGATTCTGGTCAAATTACACTTGATGGGATAGAAATTCAGAATTTACAACTCAAGTGGTTGAGGCAGCAAATGGGCCTTGTAGGCCAGGAGCCAGTGTTGTTCAATGACACTGTCCGTGCCAATATTGCATATGGAAAGCAGGGCAATGCAACTGAAACAGAAATCACAAATGCAGCAGAACTGGCCAATGCTAATAGGTTCATTAGTGGTTTACAACAGGGTTATGATACTATAGTGGGAGAGAGGGGAACACAACTATCTGGTGGGCAGAAGCAACGAATAGCAATTGCACGTGCCATAATAAAAAGTCCAAAAATATTGCTACTAGATGAGGCCACAAGTGCATTAGATGCCGGGTCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTGATGGTGAACAGGACCACTGTGGTTGTGGCACATCGTTTGTCTACTATAAAAGATGCAGATGTCATTGCGGTGGTAAAAAATGGTGTTATAGTGGAGAAAGGAAGGCATGAGACGCTCATTAATGTTAAGGATGGATTTTATGCATCATTGGTCCAACTTCATGCAAGCGCTTCAACAATATGA 3534 0.4253 MRFLDIKRWKSFHFAEVFCWMVTGERQAARIRGLYLKTILRQDIAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFVQLIATFVGGYVISFVKGWLLSLVMLSSLPLLALSGAAFAMVVERTASKGQNAYAKAAHVVEQTIGSIRTVASFTGEKQAVCNYKKFLGDAYKSGVREGIASGFGFGLVTLIIFCGYALAVWFGAKMIIEKGYDGGTVINVMVAILTASMSVGEASTSISAFAAGQAAAYKMFQTIERKPEIDSHDPSGKTLEDMHGEIELRDVYFSYPARPEELIFNGFSLHIPSGTTTALVGQSGSGKSTVISLIERFYDPQAGDVLIDGINIKELQLRWIRGKVGLVSQEPVLFASSIKDNIAYGKEGATAEEIRVAAELANAAKFIDKLPQGSDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADIIAVIHRGKMVEKGTHVELLKDLEGAYAQLVRLQEVKKESIENEDNQNRSELSSESLRKSRSQGRSLRRSGSSVGSSSHHSFSIPFGIPTGVNVPADPELEGPQEYEQRSPEVPLKRLATLNKPEIPVLLMGCVAAITNGAIFPIFGVLLSSVIKTFYEPFHEMKKDSRFWALMFVSLGLVSFIAIPARGYFFSMAGSKLIQRIRLICFEKVINMEVGWFDEVNHSSGAIGSRLSTDAASVRALVGDALGLLVQNIATALAGLIIAFVASWELALVILVLIPMIGMNGYIQIRFLKGFSADAKRMYEEASQVANDAVGSIRTVASFCAEEKVMELYKQKCESPMKTGKRLGLISGIGFGVSFFLLYSVYATCFYAGARFVKADKATFSDVFRVFFALTMAALGISQSSSLAPDSSKAKSAAASIFGLIDRKSKIDPSDESGRTLDNVKGEIEFRHVSFRYPSRSDIQIFQDLSLTIHSGKTVALVGESGSGKSTVISLLQRFYDHDSGQITLDGIEIQNLQLKWLRQQMGLVGQEPVLFNDTVRANIAYGKQGNATETEITNAAELANANRFISGLQQGYDTIVGERGTQLSGGQKQRIAIARAIIKSPKILLLDEATSALDAGSERVVQDALDKVMVNRTTVVVAHRLSTIKDADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHASASTI* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3221 1177 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 932 1169 IPR003439 GO:0005524
Dod01g3221 1177 Pfam ABC transporter transmembrane region 610 882 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3221 1177 Pfam ABC transporter transmembrane region 14 228 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3221 1177 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 14 1173 - -
Dod01g3221 1177 ProSitePatterns ABC transporters family signature. 416 430 IPR017871 GO:0005524
Dod01g3221 1177 MobiDBLite consensus disorder prediction 521 571 - -
Dod01g3221 1177 Gene3D - 275 532 IPR027417 -
Dod01g3221 1177 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 277 513 IPR003439 GO:0005524
Dod01g3221 1177 CDD ABC_6TM_Pgp_ABCB1_D1_like 12 238 - -
Dod01g3221 1177 CDD ABC_6TM_Pgp_ABCB1_D2_like 602 915 - -
Dod01g3221 1177 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 12 242 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3221 1177 Pfam ABC transporter 951 1100 IPR003439 GO:0005524
Dod01g3221 1177 Gene3D - 922 1176 IPR027417 -
Dod01g3221 1177 MobiDBLite consensus disorder prediction 547 565 - -
Dod01g3221 1177 CDD ABC_MTABC3_MDL1_MDL2 277 515 - -
Dod01g3221 1177 MobiDBLite consensus disorder prediction 521 543 - -
Dod01g3221 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 515 IPR027417 -
Dod01g3221 1177 PANTHER - 14 1173 - -
Dod01g3221 1177 Gene3D ABC transporter type 1, transmembrane domain 12 906 IPR036640 GO:0005524|GO:0016021
Dod01g3221 1177 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 611 897 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g3221 1177 SUPERFAMILY ABC transporter transmembrane region 12 261 IPR036640 GO:0005524|GO:0016021
Dod01g3221 1177 CDD ABC_MTABC3_MDL1_MDL2 932 1170 - -
Dod01g3221 1177 ProSitePatterns ABC transporters family signature. 1072 1086 IPR017871 GO:0005524
Dod01g3221 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 922 1170 IPR027417 -
Dod01g3221 1177 Pfam ABC transporter 296 444 IPR003439 GO:0005524
Dod01g3221 1177 SUPERFAMILY ABC transporter transmembrane region 593 916 IPR036640 GO:0005524|GO:0016021
Dod01g3221 1177 SMART AAA_5 304 504 IPR003593 -
Dod01g3221 1177 SMART AAA_5 959 1152 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3221 Dod-Chr1 73137909 73142836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3221 9 1171 Calmodulin-binding Proteins AT2G36910 44.634 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3221 K05658 - gmx:100800034 1805.8