Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3214 ATGCAATCAACTCCGCCAATGGCTGCCGATGCCACCACTAATGGCACAGCCTCGGCTCCGCCGTCCACGGCGGCGGAGCCTCAGTACGCATCGGCGAAGATATCAGTGTGGTGGGACATAGAGAACTGCCAGGTTCCGCGTGGGTGCGACGCGCACGCGATCGCGAAGAACATAAGCTCCGCACTCGTGAACATGAACTACTGCGGCCCCGTCTCAGTCTCCGCCTACGGCGACACCAACCGCATCCCTTCCTCCGTCCAACACGCGCTCTCCAGCACTGGCATCTCCCTCAACCACGTCCCCGCAGGTGTGAAAGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTCTGGGCAGTGGACAACCCTGCTCCTGCAAATTATTTGCTGATTTCTGGAGATAGGGACTTCTCCAGTGCCCTGCATCAGCTGCGCTTGAGGAGGTACAACATTCTTCTGGCTCAACCGCTACAAGCATCAGTGCCTCTCATTGCTGCAGCAAAGAGTGCGTGGCTCTGGACTAGCCTCATTGCTGGTGGGCCTCCTCTGCCGAGTGGCGACTTGTCGAACATAGCAAGTCGTAACTTTAGCTTTAGTTCTGAAAGGCTTCAAAACCCTTTTCCTGAACCAGTTCAACCAAAACACAAAGCAAAATACATCAATAACACCGCAAATCAGCCCAACATATCTAGAACCTCCAGTTTGCCTGTTGAAGTGCTAGGGAGTAAGAACGATTGTGGCCCTAATCTGGAACATTCACGGACAAAGTTGTTTTGCAAAGCCCCACATGAATTCTTTAGTAATAATAAGCCTGCTATCCCAACTATTAGTTCTACACCCAGTCTTTCAAGCCACCAAGACCACTCAAAAAGCAGTGGTAGTAACTATAGCAGTGGAATCCCTAGTGATTCACATCATAGTCTTCTGAGGCAAAACAACCTCCATGAGCAATCTATGTCTGGATCTGATAATATACTTCCAGCTCCTCATACTCGTGGATTTCAGCCAATTTCTTCTGGTTGTGATGGACCTTATTTCTCTGCAGTCCCAAATTCGATGCTGGAAATACATAAGCTAAATTTCCATGAATATCCAAACAATGTTGAAAGCACTAAAATTGTCCATCAGGAAACCAGAGAATATTCTAGGCTAAGCCCTAGTCAGTCTCCTAATGCGGTTAGCTTAACTGCACCAACAGGGCATAAGCCACATGGTAGCCAAGCACTTCGTTATGAGAATGTGAACCAGAGGCATTCTCGTAGCTCTGAACATTTTCATCCTTCTTCCTCCAACTTTGTTCCCAATACTAGTTCTAGTAATGCCCAGGGAATTAGAAGTTTCCCACCATCTTCTGAGTACGAGCAACACCTTATTGGCATTATTTTACTCACTTTAAACACACTGAAGGCTGAAATGGTTATGCCTACTGAAGGAAATATTGCTGATTGCATTCGATATGGAGATTCCAGATATCAGACAACCGATGTCAGGAAGGCTTTAGATTGTGCAATGGAGCACCACATGGTTGTAAAACAATGCTTAGGTCCATTACATCTGTATGCTGGTAGAAATGGGAAACTCTGGAAGTGTGTGAACCTTACAGGTGGTCATCCTAATGATGTTCCAAATGCAACATGGGCTAGAATACAGCAATTCCTTAATTCACCAACAGGAAGATCATCTATTTTGGCATCTCATTGCAGATATGAAGCATCTTTAATTCTAAGGAGATCGTGCCTGGAAGGGGTTGTGTTAGGTGAAGTATTTAGGATTCTGGAGATGATGATCACAGTCAAGAAATGGATTATACATAGTCATTCTGGATGGCAGCCGATTACTATTTCACTTGAGGAGACTAGAGATGGCACACAGAGTTGTTCTGCTGGCTCTGGTGCCACACTAGATCAATTCTGA 1917 0.4617 MQSTPPMAADATTNGTASAPPSTAAEPQYASAKISVWWDIENCQVPRGCDAHAIAKNISSALVNMNYCGPVSVSAYGDTNRIPSSVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSSALHQLRLRRYNILLAQPLQASVPLIAAAKSAWLWTSLIAGGPPLPSGDLSNIASRNFSFSSERLQNPFPEPVQPKHKAKYINNTANQPNISRTSSLPVEVLGSKNDCGPNLEHSRTKLFCKAPHEFFSNNKPAIPTISSTPSLSSHQDHSKSSGSNYSSGIPSDSHHSLLRQNNLHEQSMSGSDNILPAPHTRGFQPISSGCDGPYFSAVPNSMLEIHKLNFHEYPNNVESTKIVHQETREYSRLSPSQSPNAVSLTAPTGHKPHGSQALRYENVNQRHSRSSEHFHPSSSNFVPNTSSSNAQGIRSFPPSSEYEQHLIGIILLTLNTLKAEMVMPTEGNIADCIRYGDSRYQTTDVRKALDCAMEHHMVVKQCLGPLHLYAGRNGKLWKCVNLTGGHPNDVPNATWARIQQFLNSPTGRSSILASHCRYEASLILRRSCLEGVVLGEVFRILEMMITVKKWIIHSHSGWQPITISLEETRDGTQSCSAGSGATLDQF* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3214 638 MobiDBLite consensus disorder prediction 1 24 - -
Dod01g3214 638 Pfam NYN domain 33 169 IPR021139 GO:0004540
Dod01g3214 638 Gene3D - 27 176 - -
Dod01g3214 638 Pfam OST-HTH Associated domain 567 621 IPR025677 -
Dod01g3214 638 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 24 614 - -
Dod01g3214 638 MobiDBLite consensus disorder prediction 378 449 - -
Dod01g3214 638 MobiDBLite consensus disorder prediction 426 449 - -
Dod01g3214 638 MobiDBLite consensus disorder prediction 381 397 - -
Dod01g3214 638 MobiDBLite consensus disorder prediction 271 307 - -
Dod01g3214 638 PANTHER LIMKAIN B LKAP 24 614 IPR024768 GO:0005777|GO:0010468|GO:1903231
Dod01g3214 638 CDD PIN_limkain_b1_N_like 33 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3214 Dod-Chr1 73071619 73075052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3214 23 186 C2H2 Transcription Factor Family AT5G61190 76.220 5.47e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3214 - - aip:107646579 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3214 01 73071619 73075052 Dod01g3214 01 73071619 73075052 ECH