Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3213 ATGAGTTGTTTCAGCTGCTGTGAAGGCGATGACTCTCACGTGCCTACCGAAAGTGGAGGGCCATACATGGTGAAAAACTCAGCAGGAAATGATGGAAATCATCATGCTTCTGAAACTTCCAAGCAGGGTGCTCAAACTGTTAAAGTTCAGCCCATTGAAGTTCCTGCTATACTGGCTGATGAACTAAAAGAAATTACAGATAACTTTGGGGAAACTTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAGACTGCAGCAATCAAGAAGTTAGATGCCAGTAAACAGCCTGACGATGAATTTTTGGCCCAGGTTTCAATGGTTTCACGGCTGAAGCATGACAATTTTGTTCAATTGCTTGGTTACTGTGTCGATGGAAATTCCCGTGTTCTTGCTTATGAGTTTGCATCAAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTCTGTCATGGGCACAGAGAGTTAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAGTACTTGCATGAGAAGGCTAATCCCCACATTATTCACCGGGATATCAAATCAAGCAATGTACTAATCTTTGATGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTTCACTCCACCCGTGTTCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGGCAATTGAATGCCAAGAGCGATGTATACAGCTTTGGTGTGGTCCTTCTGGAACTTTTGACAGGAAGGAAACCTGTTGATCATACACTACCACGTGGACAGCAGAGCCTGGTTACTTGGGCTACTCCAAAACTCAGTGAAGATAAAGTCAAGCAGTGTGTAGATTCAAAACTAGGAGAAGATTACCCTCCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGAACGCAAGACCTGGCCCTGCTGTGAAAGGACAAAATCTCGGATTTATCGTCTACTCCTCCTCCTCCTCCTCCTCCTCCTTCCGGTCGGTCGGTCGCATACTCTTTCATTCTCAAAAGCCAAAGGGAGGACCCTTTCGTGTTCCATTCTCTCCCTTCCCCATTTTGTTTTTCAGATCAGTTTTGCTTAGCAGGCTAGATATGGCAGTCACTATGACAATGATGACTAAGCAGAATCTGCTGACCTACTTCTACCTTCTAGTTTATGTATCACTTTCTTCGGGCGTTATTCTGTACAACAAGTGGCTCCTCTCCACATTGTACTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGAGGGGTGGCCTTTTTGCTTATCCGTGTTCTAAAGGTTGTGTCACCGATTAAAATGACATTTAATATATATGCTACTTGTGTGGTCCCTATAAGTGCATTCTTTGCAGCAAGTCTGTGGTTTGGGAACACTGCATATTTATACATTTCTGTGGCCTTCATCCAGATGCTTAAAGCCCTGATGCCTGTGGCAACATTTCTTACGGCTGTTATTTGTGGGACTGAGAAATTAAGGTGTGACGTGTTCTTCAACATGGTGTTGATCAGCATTGGAGTTGTCATTTCCTCCTATGGGGAAATTCATTTTAATGTGCTCGGTACACTTTATCAGGTCACAGGAATAATTGCTGAAGCATTAAGGCTGGTCTTAACCCAAGTTCTTCTTCAAAAGAAGGGCTTGACACTTAACCCTATCACAAGCTTGTATTATATAGCCCCCTGCAGCTTTGTATTTCTTTTTATCCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGATCCACACATGCAGTTTAACTTCTGGATTTTTTTTTCAAATGCTCTTTGTGCTCTGGCATTGAATCTTTCAACATTCATAGTGATTGGTAGAACTGGGGCAGTAACTATTCGAGTGGCTGGAGTTTTGAAAGACTGGATGCTTATAAGTCTTTCAACTGTCTTATTTCCTGAATCAAAGATTACTGGCCTCAATATTATTGGTTATGCTATAGCTTTAAGTGGTGTTGTTTTCTACAACTACCTGAAGGTGAAGGATGTTCGCACATCCCAACCTCCTATACAGAGTGTCCAAGATGAATCTGCAAAGGAGCTCCTTAGCGAGAAAAAGGCAGATGATGATGTGAACAGCAATGAGGGGACCTCATGGAGTAATTCTGTTCATGATACTCATTTAGATGAAGAAGCACCTTTAATCTCTTCATCAAGGATATCTCATCTTGGAAGAAAGCCAGCTTAG 2373 0.4239 MSCFSCCEGDDSHVPTESGGPYMVKNSAGNDGNHHASETSKQGAQTVKVQPIEVPAILADELKEITDNFGETSLIGEGSYGRVYYGVLKSGQTAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKANPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDSKLGEDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAVKGQNLGFIVYSSSSSSSSFRSVGRILFHSQKPKGGPFRVPFSPFPILFFRSVLLSRLDMAVTMTMMTKQNLLTYFYLLVYVSLSSGVILYNKWLLSTLYFNFPFPITLTMIHMAFSGGVAFLLIRVLKVVSPIKMTFNIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLTAVICGTEKLRCDVFFNMVLISIGVVISSYGEIHFNVLGTLYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNALCALALNLSTFIVIGRTGAVTIRVAGVLKDWMLISLSTVLFPESKITGLNIIGYAIALSGVVFYNYLKVKDVRTSQPPIQSVQDESAKELLSEKKADDDVNSNEGTSWSNSVHDTHLDEEAPLISSSRISHLGRKPA* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3213 790 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Dod01g3213 790 MobiDBLite consensus disorder prediction 740 754 - -
Dod01g3213 790 MobiDBLite consensus disorder prediction 731 790 - -
Dod01g3213 790 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Dod01g3213 790 CDD STKc_IRAK 75 348 - -
Dod01g3213 790 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Dod01g3213 790 SUPERFAMILY Protein kinase-like (PK-like) 46 345 IPR011009 -
Dod01g3213 790 MobiDBLite consensus disorder prediction 9 45 - -
Dod01g3213 790 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Dod01g3213 790 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3213 790 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g3213 790 MobiDBLite consensus disorder prediction 30 45 - -
Dod01g3213 790 Pfam Triose-phosphate Transporter family 432 718 IPR004853 -
Dod01g3213 790 Gene3D Transferase(Phosphotransferase) domain 1 144 355 - -
Dod01g3213 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Dod01g3213 790 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3213 Dod-Chr1 73055038 73068808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3213 422 787 Organic Solute Cotransporters AT3G17430 75.137 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dod01g3213 TPT 3.6e-22 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3213 K13436 - tcc:18613791 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3213 01 73055038 73068808 Dod01g3213 01 73055038 73068808 ECH