Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3211 ATGGAAAGCTACATACGGCCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAGTCTGAGGCTATGTGGGAGGAACTTTGCTATGATCTGACTTCCAGCTTGAATAGGCTTCTGGATGTCTCAGATGATACTTTTTGGAGAAGTGGATGGGTTCACATCAGGGTGCAGCATCAGATAGCCTTCATTTTCAATGGTCAGGTTGTCATAGATACATCCTTACCTTTCAGAAGTAACAATTATGGCAAGATTCTCAGTGTCAGTCCAATTGCTGTACCAGCATCAAGGACAGCTCAATTTTCTGTCAAGGGTATCAACCTGATTCGCCCTAGCACTAGGTTACTGTGTGCTTTAGAAGGGAATTATCTGGCCTGTGAAGATGCTCATGAGTCAATGGATCAAAGCTCCAAGGAGCTTGAAGAGCTTCAGTGCATCCAGTTTTCATGTTCGTTCCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGCAGCAGCTTTTTTCCCTTCATAGTAGCAGAGCAGGAGGTTTGCTCTGAAATCTGTGTGCTTGAGCCTTTACTACAATTAAGTGATACTGATCCAGACGTTGAAGAGGCTGGAAAAATTAAAGCCAAAAATCAAGCCATGGATTTCATTCATGAGATGGGTTGGCTTCTTCACAGAAGCCAGTTGAAATCTAGGATTGTTCGCTTGAACTGTAGTGCAGATCTCTTTCCATTAAAACGATTCAAGTGGCTCATGGAGTTCTCTATGGACCGTGATTGGTGTGCAGTAGTGAAAAAACTATTGAACCTACTGCTTAGTGGAACTGTGAATACAGGAGATCACCCTTCCCTGTATCTTGCAGTTTCAGAGATGGGTCTCCTTCATAGAGCTGTCAGGAGAAATAGCAGGCAGTTGGTGGAGCTACTTTTGAGATATGTTCCTGAGAATATTTCTGATGATCTAGGACCTGAAGACAGGGCTCTGGTTGGTGGAGAGAATCAGAACTTGTTTAGACCAGACGTTGTTGGTCCTGGTGGTTTGACACCACTCCATATAGCAGCTGGGAAAGATGGTTCAGAGGATGTACTGGATGCTTTAACCAGTGATCCTTGCATGGTGGGAATTGAAGCATGGAAGAGTGCTCGTGACAGCACGGGCTCCACACCAGAGGATTATGCACGATTGCGGGGCCATTATGCCTACATTCACCTGGTTCAAAAGAAAATTAACAGGAGACAAGGAGGAGCTCATGTTGTGGTTGAGATTCCCAGCAATCTGACTGGGTTCAATACAAACCAGAAGCAAAATGAGTTGCCCACTACTAGCTTTGAGATTGGAAAGGCTGAAGAAAAAAGTGTTCAAAAGAGCTGCAAAATCTGTGATCATAAGCTGTCTTGTAGAACTGTAGTAGGCAAGTCTTTGGTATACAGACCTGCTATGCTGTCAATGGTGGCCATAGCAGCAGTCTGTGTCTGCGTGGCCCTTCTGTTTAAGAGCTCACCCGAAGTTCTGTATGTGTTCCAGCCCTTCAGGTGGGAATCATTGGACTACGGAACAAGCTGA 1560 0.4468 MESYIRPGCIVLTIYLRQSEAMWEELCYDLTSSLNRLLDVSDDTFWRSGWVHIRVQHQIAFIFNGQVVIDTSLPFRSNNYGKILSVSPIAVPASRTAQFSVKGINLIRPSTRLLCALEGNYLACEDAHESMDQSSKELEELQCIQFSCSFPVMNGRGFIEIEDQGLSSSFFPFIVAEQEVCSEICVLEPLLQLSDTDPDVEEAGKIKAKNQAMDFIHEMGWLLHRSQLKSRIVRLNCSADLFPLKRFKWLMEFSMDRDWCAVVKKLLNLLLSGTVNTGDHPSLYLAVSEMGLLHRAVRRNSRQLVELLLRYVPENISDDLGPEDRALVGGENQNLFRPDVVGPGGLTPLHIAAGKDGSEDVLDALTSDPCMVGIEAWKSARDSTGSTPEDYARLRGHYAYIHLVQKKINRRQGGAHVVVEIPSNLTGFNTNQKQNELPTTSFEIGKAEEKSVQKSCKICDHKLSCRTVVGKSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFQPFRWESLDYGTS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3211 519 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 1 518 - -
Dod01g3211 519 Gene3D - 261 413 IPR036770 -
Dod01g3211 519 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 518 IPR044817 GO:0003677
Dod01g3211 519 Coils Coil 124 144 - -
Dod01g3211 519 SUPERFAMILY Ankyrin repeat 287 404 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3211 Dod-Chr1 73039265 73043439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3211 1 519 SBP-box Gene Family AT3G60030 59.316 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3211 - - gmx:100809806 903.664