Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3208 ATGGAGGATTGTTGTGCCGTTTGCGCCGAGCCCTTGGAATGGGTTGCCTACGGATCTTGCCTGCACCGCGACGTCTGCTCCACGTGCGTCGCACGCCTCCGATTCATATGCGACGATCGCCGCTGCTGCATCTGCAAGACCCAATGCGACGTCGTTTTAGTCACCAAGGCTCTAGGAGATTATACGAGGATGATTAATGATTTTTCATCCCTGCCGTCTGACGTAAGGGAGGGCAAGGTTGGATCGTATTGGTACCATGAGGGTACAAATGCATTTTTTGATGATATGGACCACTACAAGATGATCAAGGCCATGTGCAGGCTTTCATGCAGTGTATGTGACAAGATGGAGGAGCAGCCACATGATGCCTCAAGGCGGCGAGCAAGGTTTAGGAATATAGAGCAGCTGAAGGGTCACTTATTTCACCGTCACAAGTTGCTTATGTGCAGTTTATGTTTGGAGGGAAGGAAGGTATTTATATGTGAGCAAAAGCTATATACTAGAGCACAGTTGAATCAACATATAAGCACAGGTGATTCTGAGGTGGATGGAAGTGAGAGAGAGAGAGGTGGCTTTATGGGGCATCCTATGTGTGAATTCTGCAGAACCCCATTTTATGGGGACAATGAACTATATACACACATGTCTACGGAACACTATACTTGTCATATATGCCAAAGGCAGCATCCAGGACAATATGAATACTATAAGAATTATGATGACCTAGAGGCAAGATATCTGCTCTATGCTTTCATTTTACCCTCTTTTGAATTAGGTGGCTCATGGCTTTACTATCTCTTGCTTCTTGTTCGTACTGAAAGTACTTTTATGAGCAAATGTTTTCTGGTGCAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAGAAGTTTGTTGTGTTTCAATCTGAAGCAGAAATGAAGAGGCATAATGCTACTGAACATGGGGGCCGCATGTCCCGGTCAAAGCGTAATGCTGCTCTCCAGATACCAACTAGCTTTCGATATAGACGTAATGAACAAGACCAACGCCGAGGAAGAGGCCGAACTTTTCGTCGTGATTTTTCTGAAAATCAACTTTCTATGGCCATTGAAGCCAGTTTGCAGATGGCTAATGCAGCACAAACTTATCATGATCCATCAATGTCAAGTAGTGGACAAGTTGCTGTTGATGAAGGGAGTGCTGATATTGATTCTATCGTTCAGCCGTTTGAATCATTAGCTACATCGGGTTCTGAATCATCTGCAAGATACCTCCACGCCTTAGGTAACTCAAGGAATGCACCGCTGGAAGATTCTTCCTTTCCTCCTCTGCCCCTGGTTTCCAGCAATGACCAACAAAGGTCCAAACAGGAGTTGGAAGGTTCTTCTAGTAATACTCTGGCAGCACGTTTGCGCCGGCAAGGCAAGAGAAATGTGTCTGTTATTAATGCTGGTAATGCTTGGCCTGCACCGGGCCGTGGACTGGTACAATCATCAAATAATCCTACACAATCTAGACCACCAACGAATGTTGCTCCTGTAGTGTCGCGTAGTTCTGGTCAGGTGAAGACAGCAAGTAGCAGTGGACCTTCACCCTCAACTTTTGCTAGTTCTATTCAGGCAACAACTAGAAATGCTCATGGACAATCATCTGTTGGTTCTTTGAGGGACACACTTGATAGTGGCAGAATTGTTCACTCTGCATCTGCTCCAAATCTCACTGAGAGCAACTCTGTTGAAGTTTCAATTTCCGATTTTCCTCCAGTTTCTGCTGCACAAGTGAGCAAGTTACCTGCAAGTGCTCAGCCTTCATTGATTGTGGAAAATGTTCACTCTGCTAACAAGTCCCTGGTTGAAAAGATTCGCGGTGCTCTTGATTTTGATGAAGATAGATATACTTTGTTTAAAGACATATCTGCTCAATATCGTCAAGGCACAGTTGATACAGATACATATTTGGACTGTGTACAACAGTTTGGCTTGTCTCATCTTGTCCTCGAATTGGCAAGATTATTACCCGATGCTCAGAAGAAGAAAGAACTTATTGAGTCTTACGACGCTAGTTTGCAAGGGAATGCTTTACAAGAAAATGGATGGGTGCGCAGTAGCTCTAGCACCCACCACAAAGATAGCAATGCTTCCAAGAAGGGCAAAGGTAAGTCTGTAGGTGGTAGTGGGAGTAACACAGCAGATAAATTAACAGATAACTTCTTAAGCACTGTACATCAACTACAGTCAAGTTATAAACCTTCAGAAGAGAATTGGGAGGTTCTATCCAGGGGGGATTACCGCACTAACAGAGGCAAATTAAAAATTGAGCAGCAGATTGATACAAATTCCGGTAATCAACCTGTGAAGACTAGTGTGCAAAGGGAGACATCAGTTGGGAGTTTATCCAATCCAAAGAGAGATGATACTGGTGGTGGCAGCAGCAAACAACGTAAGAAAACTTCCAAGTTCCTAAGAGTGCGCCTCGGTGATGGTTCTGCTTCAGCCCTTCTAGACCTTGATAATTCACTCAACGAAGCAGATCCTGGAACAACAGACAGTGCGCAAGGCAACGAGAGTGACTCTGGAGTGCTGCCTGTACGAGGGGTTTGGCGAAATGGGGGAGGTCATAGACTCTTCTCCTGA 2634 0.4491 MEDCCAVCAEPLEWVAYGSCLHRDVCSTCVARLRFICDDRRCCICKTQCDVVLVTKALGDYTRMINDFSSLPSDVREGKVGSYWYHEGTNAFFDDMDHYKMIKAMCRLSCSVCDKMEEQPHDASRRRARFRNIEQLKGHLFHRHKLLMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSERERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEARYLLYAFILPSFELGGSWLYYLLLLVRTESTFMSKCFLVQIHFRQEHFLCEDEACLAKKFVVFQSEAEMKRHNATEHGGRMSRSKRNAALQIPTSFRYRRNEQDQRRGRGRTFRRDFSENQLSMAIEASLQMANAAQTYHDPSMSSSGQVAVDEGSADIDSIVQPFESLATSGSESSARYLHALGNSRNAPLEDSSFPPLPLVSSNDQQRSKQELEGSSSNTLAARLRRQGKRNVSVINAGNAWPAPGRGLVQSSNNPTQSRPPTNVAPVVSRSSGQVKTASSSGPSPSTFASSIQATTRNAHGQSSVGSLRDTLDSGRIVHSASAPNLTESNSVEVSISDFPPVSAAQVSKLPASAQPSLIVENVHSANKSLVEKIRGALDFDEDRYTLFKDISAQYRQGTVDTDTYLDCVQQFGLSHLVLELARLLPDAQKKKELIESYDASLQGNALQENGWVRSSSSTHHKDSNASKKGKGKSVGGSGSNTADKLTDNFLSTVHQLQSSYKPSEENWEVLSRGDYRTNRGKLKIEQQIDTNSGNQPVKTSVQRETSVGSLSNPKRDDTGGGSSKQRKKTSKFLRVRLGDGSASALLDLDNSLNEADPGTTDSAQGNESDSGVLPVRGVWRNGGGHRLFS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3208 877 MobiDBLite consensus disorder prediction 493 555 - -
Dod01g3208 877 MobiDBLite consensus disorder prediction 434 467 - -
Dod01g3208 877 CDD RING-HC_ZNF598 5 46 IPR041888 -
Dod01g3208 877 MobiDBLite consensus disorder prediction 772 806 - -
Dod01g3208 877 MobiDBLite consensus disorder prediction 836 877 - -
Dod01g3208 877 MobiDBLite consensus disorder prediction 696 731 - -
Dod01g3208 877 MobiDBLite consensus disorder prediction 772 822 - -
Dod01g3208 877 PANTHER ZINC FINGER PROTEIN 598 1 244 IPR044288 GO:0061630|GO:0072344
Dod01g3208 877 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Dod01g3208 877 MobiDBLite consensus disorder prediction 484 555 - -
Dod01g3208 877 PANTHER ZINC FINGER PROTEIN 598 284 876 IPR044288 GO:0061630|GO:0072344
Dod01g3208 877 PANTHER EBR1 284 876 - -
Dod01g3208 877 PANTHER EBR1 1 244 - -
Dod01g3208 877 MobiDBLite consensus disorder prediction 841 857 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3208 1 877 C2H2 Transcription Factor Family AT3G62240 49.945 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3208 K22381 - gmx:100780426 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3208 01 72999498 73004220 Dod01g3208 01 72999498 73004220 ECH