Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3170 ATGCAGCTTTCAAAGTTGGTCTTTTGCTTCATTTTCGCATTCCTAATCATTGTTATTAGTGTTTGTGAATCCCAGGATTGTGCCAAACCACCCAAAACCGTTCTTGTTAGTCAATCAGGATATGCAGACTTCACAACAATTCAAAGTGCCATTGACTACTCTGTCCCCTCAGGAAACTCTCACTGGATTCACATCCGAATTGCCCCTGGCACTTACAGAGAGAAAGTGTTAATTCCGATGGACAAACCTTGCATTTATCTTGAAGGAGCTGGCAGGACAATCACGAGTGTAGAATGGGGTGACCATGGCACTGCACATTTCAGTGCTACTTTCAATTCAAAAGCAAATAATACGGTTGCAAAAGGCCTTGCCTTCAAGAATACGTACAACTTAGTAGAGCAGAGTAGCGTCATTCAAGCTGTGGCAGTGAGGGTCCATGCAGACAAATGTGCTTTCATTGATTGTGGTTTTCTGGGGGTGCAAGACACCCTCTTTGATTCTTATGGCCGCCATTACTATTACAATTGCTACATTCAAGGTGGAGATGATTTCATATTTGGATGTGGTCAATCAATCTTTGAGGCAAGTACAATAAATTTTTCAATGGGACTTGGTCCCAAAATGGATGGGGTTATTACAGCTAGCGAAAGGGATTCAGATGATAGCAGTGGGTTTGTGTTCAAAAATTGTAACATAACTGGAAGCGGTGGAAAAGCTCAACTTGGGAGAGCTTTGGAAGATTATGCCAGAGTCATCATAGCCAATTCATTCCTATCAGATGTGGTTAGACCAGAGGGTTGGAGTTCTCTGGGCCATGATGTATCAATGATCACGTTTGTGGAGGAGGGATGCTATGGACCAGGAGCAAACAAATACCAGCGTGTGCCTTGGATGAAACACCTAAGCGGTTCTGAGCTTGATCAGTTCGTGAACATCTCTTTTATTGACACAGAAGGGTGGATTGCAGATATATATTCCCTTAACATGTTGATTTGA 996 0.4267 MQLSKLVFCFIFAFLIIVISVCESQDCAKPPKTVLVSQSGYADFTTIQSAIDYSVPSGNSHWIHIRIAPGTYREKVLIPMDKPCIYLEGAGRTITSVEWGDHGTAHFSATFNSKANNTVAKGLAFKNTYNLVEQSSVIQAVAVRVHADKCAFIDCGFLGVQDTLFDSYGRHYYYNCYIQGGDDFIFGCGQSIFEASTINFSMGLGPKMDGVITASERDSDDSSGFVFKNCNITGSGGKAQLGRALEDYARVIIANSFLSDVVRPEGWSSLGHDVSMITFVEEGCYGPGANKYQRVPWMKHLSGSELDQFVNISFIDTEGWIADIYSLNMLI* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3170 331 PANTHER PECTINESTERASE 7 326 - -
Dod01g3170 331 Pfam Pectinesterase 34 316 IPR000070 GO:0030599|GO:0042545
Dod01g3170 331 Gene3D - 28 327 IPR012334 -
Dod01g3170 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 326 - -
Dod01g3170 331 SUPERFAMILY Pectin lyase-like 30 321 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3170 Dod-Chr1 72538985 72551158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3170 8 269 Carbohydrate Esterase AT2G19150 45.221 3.42e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3170 - - adu:107492287 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3170 01 72538985 72551158 Dod01g3170 01 72538985 72551158 ECH