Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3161 ATGGACAGTAATGCCTCCCCTAAACTTGAGTCAGAAGAATCTTCTAAGCTCAAATCGGAGACTCAAGCATCCAAGAAAAGGAAAATGGTTCAGAAAACTGTTGTCACGGTGAGGATAGGAGAGAAAAATGTTAGCAGGCTGAAGAATGAAGGGCCACCTTCAGATTATTGGTCTTGGAGGAAATATGGACAAAAGCCAATTAAAGGGTCTCCATATCCAAGGGGCTATTACAGGTGCAGCACATCCAAGGGCTGTTCAGCCAAGAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAACGCTCATCATCACATACACCTCTACACACAACCATCCAGCTCCTGATGTAATCGCCACCACAAATTCAGCCCAAAAACCAAAAGAATCAGAACCTGAAACCACTGAAGAAGAAGAAGACCTCCCAGCCACCTCAAAGGAGGAAGACCAACAACACACAGAACAGCAACACATGAATCACAATCCTACCGTGACCACTGATGATCAAGGTACTACAACTGAAGAAAGTTTCCATTACTTGCAATCTCCAATACGGTGCCATGAAGAGATTATAATAGACCAAGAAGACCCCTTCAAAGTACTAAGCTCAGAGAAAACTTTTGACAGAATAGATCTACGCTTAGAGGAGGAGCCCCTATGCTATGCACAGCTCAAGAATTTCGCAGCAAACAAATCAGAAGAGCTTGATTTTTTCGATGAGCTTGAGGAACTGCCCATGTCTTCATCTTTCTTGCACTTCACGAGTAGCATTTTATCCGATGAAATGATTCCCGTTGCTCCTTCTTGA 804 0.4353 MDSNASPKLESEESSKLKSETQASKKRKMVQKTVVTVRIGEKNVSRLKNEGPPSDYWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASTLIITYTSTHNHPAPDVIATTNSAQKPKESEPETTEEEEDLPATSKEEDQQHTEQQHMNHNPTVTTDDQGTTTEESFHYLQSPIRCHEEIIIDQEDPFKVLSSEKTFDRIDLRLEEEPLCYAQLKNFAANKSEELDFFDELEELPMSSSFLHFTSSILSDEMIPVAPS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3161 267 MobiDBLite consensus disorder prediction 45 74 - -
Dod01g3161 267 MobiDBLite consensus disorder prediction 111 173 - -
Dod01g3161 267 SUPERFAMILY WRKY DNA-binding domain 49 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g3161 267 ProSiteProfiles WRKY domain profile. 54 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g3161 267 MobiDBLite consensus disorder prediction 155 173 - -
Dod01g3161 267 Gene3D WRKY domain 37 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g3161 267 MobiDBLite consensus disorder prediction 111 127 - -
Dod01g3161 267 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 12 252 - -
Dod01g3161 267 MobiDBLite consensus disorder prediction 1 31 - -
Dod01g3161 267 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g3161 267 MobiDBLite consensus disorder prediction 1 27 - -
Dod01g3161 267 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g3161 267 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 252 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3161 Dod-Chr1 72469297 72471055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3161 11 125 WRKY Transcription Factor Family AT3G58710 58.621 1.08e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g3161 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3161 - - gmx:100127368 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3161 01 72469297 72471055 Dod01g3161 01 72469297 72471055 ECH