Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3159 ATGGAGCTACTGGGTGAGATTGACCCCCATCCTAGTGGGAATAATGGAAAAAGAGCCAATTTATTCAAAGATCAAAATCAGCAACAGCAACAACATGAACTCAAAGTTGATGACATGATCTTAGAAGAGGTCAACTTTGACCCTCATCTCCAACCAACACACCTGTTTCATGAAACTACAGGGCTAAAGAATCAAGTAGTGTCAAGTCCAGACAATAATAAGCATGAGGCACCATCATCTTTAACAATAGCATCCTTGGAGCTCTTGAGAAATTATGGAACCAAGTTCAAGAAGCTGAGCGGGGAAAACATTAGTGACAACTTCAGCAACATTGGGACTTGTTTGGATCATCATCACCAGAAGTTGTCAACAGAAGAAATAATACGAGTGGCAGGAGCAAGGTACGTGCATTATTCTGCACATTGGAATGATAATTTTTGCATCCCTATGCACCCTTATGGATTGGATCTCGGAAGCTTGTCTGAGGAAGAGAATAGAGATGTTGAGCTTGCTCAGTTTCTCCTTGCTGCTGCTGAGAGGGTAGGTTGCCAACAATATGAACGTGCAAGCAGGTTGCTTCTTCATTGTCAGTGGAATTCAGATGTCAATGCAAACGCTGCTCAAAGGGTCATCTTTCATTTTGCTGAAGCACTCAGGGAGAGAATTAACAAGGAAACAGGAAGGGTAGTGACATCATCATCTTGTTATGGACCTGAGAGGAATGAAGAAAGAGAATTGCTTTTGAAGTTGGATACCAACAAGGCCCTTACTTGCCATCAGAAGATGCCTTTTAATCAAGTGATGCAATTCACTGGTGTACAAGCTATGGTGGAACATGTTGCATCTGAGACCAAGATCCACCATATAGATCTTGATATAAGAAGTGGGGTGCAGTGTACGGCTCTTATGCAAGCACTGGCAGACCGCAAGGATTGGACAGTGAAGTTTATGAAGATATCAGCTATTGGAACCACTGCATGCAAGGCAAGGATAGAAAAGACAGGTCAAAGGTTAGCTAGTTTTGCTGAATCCTTGAACTTGCCCTTTTCATATAAGTCAGTTATTGTGACAGACATGGCAGAAATCAAGGTCGATCATTTTGATATTGAAGAGGATGAAGCTGTGGTTGTGTACTGTCCTTATTTTCTGAGGACTTTGGTGTCAAGGCCTGATTGCTTGGAAAACTTGATGCTTGTTATAAGGAATATCAGACCCTCTATAATGATAGTGCTTGAAGTTGATGCAAATCATAATACACCTTCCTTTGTGAACCGCTTCGTTGAAGCATTGTTCTTCTACTCAGCAATTTTTGATTGCGTTGAAACCTGCATGGAACAGGACACTGAGAGCAGAATGGCAATTGAAGCAGTTTTGTCTGCGGGGATAAGGAACATTGTTGCTGCAGAAGGCAGAGAAAGGACGGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTTCAAGGTACAAAATGGTGGAAACAGGATTCAGTGAGTCCTCTCTTTACCAAGCTAATTTGGTTGCCAAAGAGTTTGCTTTTGGGAAATTCTGCACTATGGACAACAATGGCAGGAGTCTAATAGTTGGATGGAAGGGGACCCCAACGCATTCACTCTCAGCTTGGAGGTTTGCATGA 1638 0.4225 MELLGEIDPHPSGNNGKRANLFKDQNQQQQQHELKVDDMILEEVNFDPHLQPTHLFHETTGLKNQVVSSPDNNKHEAPSSLTIASLELLRNYGTKFKKLSGENISDNFSNIGTCLDHHHQKLSTEEIIRVAGARYVHYSAHWNDNFCIPMHPYGLDLGSLSEEENRDVELAQFLLAAAERVGCQQYERASRLLLHCQWNSDVNANAAQRVIFHFAEALRERINKETGRVVTSSSCYGPERNEERELLLKLDTNKALTCHQKMPFNQVMQFTGVQAMVEHVASETKIHHIDLDIRSGVQCTALMQALADRKDWTVKFMKISAIGTTACKARIEKTGQRLASFAESLNLPFSYKSVIVTDMAEIKVDHFDIEEDEAVVVYCPYFLRTLVSRPDCLENLMLVIRNIRPSIMIVLEVDANHNTPSFVNRFVEALFFYSAIFDCVETCMEQDTESRMAIEAVLSAGIRNIVAAEGRERTVRNVKIDVWRRFFSRYKMVETGFSESSLYQANLVAKEFAFGKFCTMDNNGRSLIVGWKGTPTHSLSAWRFA* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3159 545 ProSiteProfiles GRAS family profile. 161 543 IPR005202 -
Dod01g3159 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 543 - -
Dod01g3159 545 Pfam GRAS domain family 171 543 IPR005202 -
Dod01g3159 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3159 Dod-Chr1 72459846 72461483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3159 168 544 GRAS Transcription Factor Family AT1G66350 30.159 2.54e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod01g3159 GRAS 2.2e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3159 - - ahf:112695737 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3159 01 72459846 72461483 Dod01g3159 01 72459846 72461483 ECH