Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3154 ATGGCTCCAAGTCAGCGTACGGCGAGCTCGGGATCGGAAATCAGCGGATCTTCGCCGCAGTGCTCCGATGGAGTCGTGATCGACGAGAGGAAGCGGAAGAGGATGCTGTCAAACCGCGAATCGGCACGGCGATCGCGGATGAGGAAGCAGAAGCAGCTGGAGGATCTTGCCGACGAGGCGAGCAAGCTTCAAGGCGCGAACAAGAAGCTTGAAGAGGCAATAAAGGCGCAGGAGGAGGCGCTGGCGGACACGGAGGCCGCCAACGGCGTCATCAGGGCACAAACCATGGAGCTCGCCGACCGCCTCCGGTTCCTGAACTCGATCCTCGAGATCGCGGAAGATGTCAGCGGGTTATCCGTTGAGATCCCCGAGATCCCGGACCCGCTCCTGAAACCATGGCAGATCCCTCACCCTATTCAACCGATAATGGCTTCCGCGGACATGTTCCTGCATTGA 456 0.5987 MAPSQRTASSGSEISGSSPQCSDGVVIDERKRKRMLSNRESARRSRMRKQKQLEDLADEASKLQGANKKLEEAIKAQEEALADTEAANGVIRAQTMELADRLRFLNSILEIAEDVSGLSVEIPEIPDPLLKPWQIPHPIQPIMASADMFLH* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3154 151 Pfam bZIP transcription factor 30 80 IPR004827 GO:0003700|GO:0006355
Dod01g3154 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 149 - -
Dod01g3154 151 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 149 - -
Dod01g3154 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Dod01g3154 151 MobiDBLite consensus disorder prediction 1 56 - -
Dod01g3154 151 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Dod01g3154 151 Gene3D - 28 85 - -
Dod01g3154 151 SUPERFAMILY Leucine zipper domain 30 78 IPR046347 GO:0003700|GO:0006355
Dod01g3154 151 MobiDBLite consensus disorder prediction 25 56 - -
Dod01g3154 151 MobiDBLite consensus disorder prediction 1 22 - -
Dod01g3154 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 75 IPR004827 GO:0003700|GO:0006355
Dod01g3154 151 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Dod01g3154 151 Coils Coil 39 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3154 Dod-Chr1 72427524 72427979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3154 24 149 bZIP Transcription Factor Family AT3G62420 57.143 7.08e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g3154 bZIP_1 6.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3154 K25786 - gmx:778144 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3154 01 72427524 72427979 Dod01g3154 01 72427524 72427979 ECH
Dod01g3154 01 72427524 72427979 Dod06g1989 06 31257375 31258749 ECH
Dod01g3154 01 72427524 72427979 Dod06g1989 06 31257375 31258749 PCT