Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g3148 | ATGGAAGAGGTTGTCTTGCTTGTCGATGACCTGAAATCGCTTTCCGGGATTCATCGCTGTAGAATATGTCATGAAGAAGAAGAGTTCGAGAGCCCATCAAGCTTGGAAGCACCCTGTGCTTGTTCTGGTACCGTTAAGTTCGCTCATAGAGATTGCATTCAGAGATGGTGCAACGAGAAAGGAAACACAATATGTGAAATATGTCTCCAGCAATATGAACCTGGATATACAGCTCATCCTAAGAAGTCTGAGATAAATGACGAGGCAATGTCCTTTAGGGTGGAGCAAGAACCGTCAAACGCAAGAATAAATGCTAGCACTATGGGTGAAGTTGAAGGAGTTGCATTAGAAGGCGATTACTCTGAATGCAGCTCTGCCGCTGACAGAAGCGCGTCTTGCTGTCGATCACTAGCATTAGCTTTTACATTTGTCTTGCTTGTAAGACATCTTTTCACAGTGATTATAAATGGAACGGAAGATTACCCATTTACACTTATAACAGTAATTATACTAAAGGCTAGCGGGATTATTATACCAATGTACATAATTATTTGGACGATCGGAGCCATTCAGAACAGTATTCAGCAACACTATCAGGATTATGACTACGGCAGATCAATGTCTAATGGAAATGAAGACCAGTCACGGCTTGATGCATATGCAAGACATATAGATTATTGA | 681 | 0.4141 | MEEVVLLVDDLKSLSGIHRCRICHEEEEFESPSSLEAPCACSGTVKFAHRDCIQRWCNEKGNTICEICLQQYEPGYTAHPKKSEINDEAMSFRVEQEPSNARINASTMGEVEGVALEGDYSECSSAADRSASCCRSLALAFTFVLLVRHLFTVIINGTEDYPFTLITVIILKASGIIIPMYIIIWTIGAIQNSIQQHYQDYDYGRSMSNGNEDQSRLDAYARHIDY* | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g3148 | 226 | SMART | ringv_2 | 19 | 69 | IPR011016 | GO:0008270 | |
Dod01g3148 | 226 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 12 | 75 | IPR011016 | GO:0008270 | |
Dod01g3148 | 226 | PANTHER | AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED | 1 | 209 | - | - | |
Dod01g3148 | 226 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 1 | 209 | IPR033275 | - | |
Dod01g3148 | 226 | CDD | RING_CH-C4HC3_MARCH | 20 | 68 | - | - | |
Dod01g3148 | 226 | SUPERFAMILY | RING/U-box | 18 | 73 | - | - | |
Dod01g3148 | 226 | Pfam | RING-variant domain | 20 | 68 | IPR011016 | GO:0008270 | |
Dod01g3148 | 226 | Pfam | Protein of unknown function (DUF3675) | 74 | 187 | IPR022143 | - | |
Dod01g3148 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 79 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g3148 | Dod-Chr1 | 72375368 | 72379160 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g3148 | 20 | 68 | C3H Transcription Factor Family | AT2G37950 | 40.816 | 2.95e-07 | 47.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g3148 | - | - | gmx:100802379 | 301.212 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g3148 | 01 | 72375368 | 72379160 | Dod01g3148 | 01 | 72375368 | 72379160 | ECH |