Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3140 ATGGCGCATCAAAGAGCCACGCTCTTGTTCCTTCTTCTATGCGCTCTCTGCTATTCTCTCGACGTCATTGCTGGAAAGAGCTATTACGATGTACTTCAAGTGTCTAAGGGTGCATCGGACGATCAGATAAAGAGGGCCTATAGGAAGCTCGCATTGAAGTACCACCCTGATAAGAACCAGGGCAATGAAGAAGCTAATAAGAGATTTGCTGAGATTAACAATGCATATGAGGTGTTGTCGGATAGTGAGAAGAGAAGTATTTATGATAGGTATGGTGAGGAGGGTTTGAAGCAGCATGCTGCTAGTGGAGGTAGAGGTGGTGGAATGGGCATGAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGTGGTTCAATGGAGGAGGAAGAGAGGATTGTAAAAGGTGATGATGTGATTGTTGAACTGGATGCAACCCTTGAAGATTTGTACATGGGAGGTTCCTTAAAGGTTTGGAGGGAGAAAAATGTTGTAAAGTCAGCACCTGGGAAGAGGCGTTGTAACTGTAGAAATGAGGTTTATCACAAGCAAATTGGGCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGCGATCAGTGTCCTAATGTCAAATACGTAAGGGAGGGATATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAGGTGCTATTTTATGAGGATGGCGAGCCCATAATCGATGGAGAATCTGGAGATTTAAGGTTTCGTATCCGTACTGCAGCACATGATATCTTCAGAAGGGAAGGCAACGACTTGCATGCCACTGTCACTATAACCCTGGTTCAAGCCCTTGTTGGTTTTGAGAAGACCATTACGCACTTGGATGAGCATTTGGTGGACATAAGCACAAAGGCTATTACAAAGCCAAAGCAAGTGAGGAAGTTCAAAGGGGAGGGCATGCCATTGCATATGAGCACGAAGAAAGGCGATCTTTATGTCACTTTTGAGGTTCTCTTCCCCACGTCACTAACGGAGGAACAAAAAACAAAGATAAAAGAAATTCTTGGTTAG 1041 0.4428 MAHQRATLLFLLLCALCYSLDVIAGKSYYDVLQVSKGASDDQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSEKRSIYDRYGEEGLKQHAASGGRGGGMGMNIQDIFSSFFGGGSMEEEERIVKGDDVIVELDATLEDLYMGGSLKVWREKNVVKSAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRFRIRTAAHDIFRREGNDLHATVTITLVQALVGFEKTITHLDEHLVDISTKAITKPKQVRKFKGEGMPLHMSTKKGDLYVTFEVLFPTSLTEEQKTKIKEILG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3140 346 CDD DnaJ 28 81 IPR001623 -
Dod01g3140 346 SMART dnaj_3 26 84 IPR001623 -
Dod01g3140 346 CDD DnaJ_C 136 333 - -
Dod01g3140 346 Pfam DnaJ domain 28 89 IPR001623 -
Dod01g3140 346 PANTHER BNAA09G39960D PROTEIN 9 345 - -
Dod01g3140 346 Gene3D DnaJ domain 24 129 IPR036869 -
Dod01g3140 346 SUPERFAMILY Chaperone J-domain 25 125 IPR036869 -
Dod01g3140 346 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 9 345 IPR044713 GO:0006457|GO:0030544
Dod01g3140 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 134 252 IPR008971 GO:0006457|GO:0051082
Dod01g3140 346 Coils Coil 62 82 - -
Dod01g3140 346 Pfam DnaJ C terminal domain 140 330 IPR002939 -
Dod01g3140 346 Gene3D - 130 250 - -
Dod01g3140 346 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Dod01g3140 346 PRINTS DnaJ domain signature 47 62 IPR001623 -
Dod01g3140 346 PRINTS DnaJ domain signature 29 47 IPR001623 -
Dod01g3140 346 PRINTS DnaJ domain signature 64 84 IPR001623 -
Dod01g3140 346 PRINTS DnaJ domain signature 84 103 IPR001623 -
Dod01g3140 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 255 339 IPR008971 GO:0006457|GO:0051082
Dod01g3140 346 Gene3D - 252 330 - -
Dod01g3140 346 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3140 Dod-Chr1 72286807 72291747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3140 26 91 C2H2 Transcription Factor Family AT1G74250 43.662 3.13e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3140 K09517 - gmx:100799701 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3140 01 72286807 72291747 Dod01g3140 01 72286807 72291747 ECH