Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3121 ATGGCTGCTGCATTGTCCTTTTCCGTGGCATCGGTTGTGGAGGATGTGCTTCAACAGCACGGTACTCGCCTCAAAGATCTTGATTTGGAATCCAGAAAAGCAGAAGAAGCCGCATCCAGAAGATATGAAGCAGCAGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCAAAAGATTTACCTGCAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATCCTTTGTAATGTTATCAACAAGGTTCAACCCGGAGCTGTACCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCAATGATCCCTGATGGGGCACCATTATCCGCATATCAGTATTTTGAAAACGTGAGGAATTTCCTGGTTGCTGTCCAGGAAATTGGACTTCCTACTTTTGAGGCATCCGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGTGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAGGCTGGGGCAAATGGTGTTTGGAAATTCGGTGGAAATCTTAAACCCACCATCTCTGCAAAATCTTTTGTGAGAAAGAACTTAGAGCCGTTTACTAATTCCTTGTCAAGGACCTCCTCGATTAATGAAAAGTCTCTGACTGGTGTTGCCACGGAATCTGAGTCTTATAAAATGTCTGGTTCCCATTCTTTGAGTACGCTTGTTCACGCAGTTCTATCAGATAAGAAGCCAGAAGAAGTGCCAATGTTGGTTGAATCCGTTTTGAACAAGGTTGTAGAAGAGTTTGAGCATCGCATTGCAAGCCGTGGTGAACAGCCAAAGATGACTTCGAGAGATTCTGTTTCTCAAAAGTTTGTTGTGGCAGATAAAAAGGCGGAGAACAAGATTCATATGGTAACAAAGAAAGAGGATTTCATTCAGAAAAATCGTGTTGCTGCTGAGGAATCGCAAAGACAACTCCTGAAGCACCAAATGCTATTTGATCAACAGCAAAGAGATATTCAAGAATTAAAGCACACTCTCTACAACACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCAGGAGGAGTTCTATAATCTTGGCATGCACATTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATATAATCAAGTCCAGGATCTTAAAGGAAGCATTAGGGTTTATTGTCGAGTAAGACCCTTCTTTCCTGGACAACCTAACCAGTTGAGCACAGTCGAAAATATAGAAGATGGAACTATCACTATTAACATTCCTTCGAAGAATGGGAAGGGACGGAAATCTTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGTGGAGGTCTTCTTGGATATGCAGCCACTTGTTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATACGGCCAAACAGGATCAGGAAAAACCTACACTATGACTGGACCAAAAGAAATCACAGAGAAAAGCCAAGGTGTAAACTACAGGGCTCTAAGTGATTTGTTTCTTATAGCAGATCAAAGAAAGGATACTTTCCACTATGATGTTTCTGTTCAAATGATTGAGATATATAATGAACAAGTCAGGGATCTACTGGTTAATGATGGAACAAACAAAAGATTAGAAATCCGTAGCAGTTCCCACAAAGGGCTGAGTGTGCCAGATGCAAGCCTTGTCCCAGTATCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCAAAGGAACCGCGCAGTTGGAGCAACAGCCCTTAATGACCGTAGTAGTCGGTCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAACTATTCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGGAGTGAAAGGGTAGACAAATCTGAGGCCACGGGAGATAGACTAAAAGAAGCACAGCACATCAACAAATCCCTTTCAGCTTTAGGCGATGTCATCGCTTCCCTTGCCCAGAAGAACTCACATGTTCCCTACAGAAATAGTAAACTGACACAGTTACTCCAAGATTCACTTGGAGGACAGGCCAAAACACTAATGTTTGTTCATATAAGTCCAGAGAGTGATGCTGTTGGAGAAACACTTAGTACCTTAAAATTTGCAGAAAGAGTTGCTACTGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATAGTACGGATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTGAAGGCAGCAATGGCAAGAAAGGAAGGGGAATCAGAACATTCTTTCTCTGCTAGTTCTGAAAAATACAGGACAAAAGCTAGCGATCTATCACCTTATACTGGGGATAACCTTGGATGTCGACGACCAATGGTTGATGTTGGCAACATTGGGCTTCAGAGCAAGACCACATTTAGGCGCAAAACTCAGAGCTTTGATTTTGATGAGATGTCATCAAACTCACCACCCTGGCCCCCAGTAAACAGCCCTGGACAAAACTATGCAGAAGATGACAAAGAACCTGGTTCAGGAGAATGGGTCGATAAGGTCATGGTAAACAAGCAAGATGTGAACAAAACTGACAATAACCTCTTAGGGTGTTGGGAAGCAACAGGGAATGGGAACTTATCCGAAGTCTTTTATCAGCAATATCTTCAAGACTCTTCCAAAATGTACTCGGAACAATCCTATAACATGTTCATGGGAAGCAACCAGTTTAACATGGCAGGTTCGGATGACATGGATGAGCTTGATGCTGCAACCAGCGATTCCTCCGAACCCGACTTGCTTTGGCAATTTAATCATTCCAAACTAACCAGCATGACCAATGCAATTGGATCAAAGACTAAGAGATCTGTGCCAAAGGCAGCAAAAAGCCCAGGAATAAGCAAGAATGCCCTGCATCCATCTCCTTCTGTCTCACATCGAACAGGAAGGCAACCAGCTGCAGCTGACATGAAACGAAAAGCAGGCAATAGAAAGTAA 2961 0.4272 MAAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPVDSAMIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKQAGANGVWKFGGNLKPTISAKSFVRKNLEPFTNSLSRTSSINEKSLTGVATESESYKMSGSHSLSTLVHAVLSDKKPEEVPMLVESVLNKVVEEFEHRIASRGEQPKMTSRDSVSQKFVVADKKAENKIHMVTKKEDFIQKNRVAAEESQRQLLKHQMLFDQQQRDIQELKHTLYNTKAGMQFMQMKFQEEFYNLGMHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQPNQLSTVENIEDGTITINIPSKNGKGRKSFNFNKVFGPSATQVEVFLDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRKDTFHYDVSVQMIEIYNEQVRDLLVNDGTNKRLEIRSSSHKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAVGETLSTLKFAERVATVELGAARVNKDSTDVKELKEQIASLKAAMARKEGESEHSFSASSEKYRTKASDLSPYTGDNLGCRRPMVDVGNIGLQSKTTFRRKTQSFDFDEMSSNSPPWPPVNSPGQNYAEDDKEPGSGEWVDKVMVNKQDVNKTDNNLLGCWEATGNGNLSEVFYQQYLQDSSKMYSEQSYNMFMGSNQFNMAGSDDMDELDAATSDSSEPDLLWQFNHSKLTSMTNAIGSKTKRSVPKAAKSPGISKNALHPSPSVSHRTGRQPAAADMKRKAGNRK* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3121 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 748 IPR027417 -
Dod01g3121 986 SMART kinesin_4 389 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 MobiDBLite consensus disorder prediction 936 986 - -
Dod01g3121 986 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 983 - -
Dod01g3121 986 Coils Coil 17 37 - -
Dod01g3121 986 PRINTS Kinesin heavy chain signature 586 603 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 PRINTS Kinesin heavy chain signature 666 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 PRINTS Kinesin heavy chain signature 617 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 SUPERFAMILY Calponin-homology domain, CH-domain 36 171 IPR036872 -
Dod01g3121 986 MobiDBLite consensus disorder prediction 745 759 - -
Dod01g3121 986 ProSiteProfiles Kinesin motor domain profile. 391 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 Gene3D Kinesin motor domain 386 757 IPR036961 -
Dod01g3121 986 Coils Coil 723 750 - -
Dod01g3121 986 Pfam Kinesin motor domain 397 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g3121 986 MobiDBLite consensus disorder prediction 745 767 - -
Dod01g3121 986 Gene3D - 25 190 IPR036872 -
Dod01g3121 986 CDD KISc_C_terminal 389 718 - -
Dod01g3121 986 Pfam Calponin homology (CH) domain 39 160 IPR001715 GO:0005515
Dod01g3121 986 MobiDBLite consensus disorder prediction 806 835 - -
Dod01g3121 986 ProSiteProfiles Calponin homology (CH) domain profile. 38 160 IPR001715 GO:0005515
Dod01g3121 986 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 3 983 - -
Dod01g3121 986 SMART ch_5 40 158 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3121 Dod-Chr1 71959653 71966107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3121 379 768 Calmodulin-binding Proteins AT5G65930 40.657 6.68e-79 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3121 K10406 - gmx:100795476 1642.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3121 01 71959653 71966107 Dod01g3121 01 71959653 71966107 ECH
Dod01g3121 01 71959653 71966107 Dod06g1814 06 26060349 26067724 ECH