Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3120 ATGTTTGGCATCGTCGATTCTAACAGTGAAGTTTGTTATTATTCAGTGCTTGGTGTTTGCAAGCACTCAACCGATGACGAAATCCGATGCGCTTATCGTAAGATGGCTCTGAAATGGCATCCAGATCGATGGATCAAAGAACCAAGGCTTGCACTCGAAGCGAAGAAGCGGTTTCAGCGTATTCAAGAGGCTTATTCAGTTTTGTCCAATAAAGGGAGGAGAATGATATATGATGCCGGGATGTTTGGTCTGATTGGAGAGGACGACGATGAGGGATTTGTTGATTTCATGCAAGAAATGGTCTTGATGATGCAAAAAGTGAGACCCAAGGATGAGAATGGCATGTTGGAGGATCTCCGGGGAATGCTAGTGGACATGATGGAAGATAGTGAAGGGACGGGTAAATCTGGGTTAAGCTGGAGCTCATCTACTAGCCCTAGAAAAAGAACACTAACATATCAATTGTCAATACCTCATCATCTCGCGGAGTATCTGTTTTTTCTTCCCCTGCCAATTGCCATTGAGAGCCTACAGAACCTACATGGCCATGGGGCGTATATATCAGCCATTCTTTGGGAATAA 582 0.4433 MFGIVDSNSEVCYYSVLGVCKHSTDDEIRCAYRKMALKWHPDRWIKEPRLALEAKKRFQRIQEAYSVLSNKGRRMIYDAGMFGLIGEDDDEGFVDFMQEMVLMMQKVRPKDENGMLEDLRGMLVDMMEDSEGTGKSGLSWSSSTSPRKRTLTYQLSIPHHLAEYLFFLPLPIAIESLQNLHGHGAYISAILWE* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3120 193 PRINTS DnaJ domain signature 14 32 IPR001623 -
Dod01g3120 193 PRINTS DnaJ domain signature 53 73 IPR001623 -
Dod01g3120 193 PRINTS DnaJ domain signature 32 47 IPR001623 -
Dod01g3120 193 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Dod01g3120 193 PANTHER PUTATIVE, EXPRESSED-RELATED 4 150 - -
Dod01g3120 193 SUPERFAMILY Chaperone J-domain 9 100 IPR036869 -
Dod01g3120 193 Pfam DnaJ domain 13 78 IPR001623 -
Dod01g3120 193 SMART dnaj_3 11 73 IPR001623 -
Dod01g3120 193 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Dod01g3120 193 Gene3D DnaJ domain 5 91 IPR036869 -
Dod01g3120 193 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 4 150 - -
Dod01g3120 193 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3120 Dod-Chr1 71954907 71956968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3120 12 79 C2H2 Transcription Factor Family AT1G74250 46.377 2.94e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3120 - - gmx:100794942 248.44