Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3099 ATGATCATGATACCACGCCCCTTGTTACTGCTTGCGTTGTTTCTTTCATCCCAAGCAAGTGCTTATTACATGGTATTTGCAAAAGGGAATGATAATAATGTTAGAGAAGCATGCGGTGTGACAAGGTACAAAGACCTTTGTGTCCATTCACTAGCACAATTCTCCAACACTGCGGGAAGAAGCCCCAGCAAGTGGGCACGTGCGGGGGTGTCAGTGACGATAGGAGAGGTCAAGAATGTTCAAGCGTATCTGACTCAGTTGAAGAAGTATGGGCACTTTGGAGGAAGAAACAGAGTTGCCCTTTCAGATTGTGTTGAGTGTTTTGCTGATGCACTTGATGAGCTTCACAGATCACTTGGTGTCCTAAGGAGGCTAAGCAAAAGCACGTTTAGTACCCAGATAGGGGACCTCAACACATGGATAAGCGCAGCACTCACTGACCAAGACACATGCCTTGACGGGTTTCAAGGCCAAACTAAAAAGAAGCAAATCAAATTGCTGCAAAATCGGGTGCAGAATGTGTCATACATAACTAGCAACGCTCTAGCCCTTGTCAACAAGCTTGCCACCACAGGCCTGGGAAGCATCAGTGATCCATAG 600 0.465 MIMIPRPLLLLALFLSSQASAYYMVFAKGNDNNVREACGVTRYKDLCVHSLAQFSNTAGRSPSKWARAGVSVTIGEVKNVQAYLTQLKKYGHFGGRNRVALSDCVECFADALDELHRSLGVLRRLSKSTFSTQIGDLNTWISAALTDQDTCLDGFQGQTKKKQIKLLQNRVQNVSYITSNALALVNKLATTGLGSISDP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3099 199 SMART PMEI_2 29 184 IPR006501 GO:0004857
Dod01g3099 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 190 IPR035513 -
Dod01g3099 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 188 IPR035513 -
Dod01g3099 199 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 19 183 - -
Dod01g3099 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 183 - -
Dod01g3099 199 CDD PMEI-like_3 37 190 - -
Dod01g3099 199 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 188 IPR006501 GO:0004857
Dod01g3099 199 Pfam Plant invertase/pectin methylesterase inhibitor 33 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3099 Dod-Chr1 71672309 71673422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3099 34 196 Carbohydrate Esterase AT3G14310 33.533 9.19e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3099 - - adu:107492431 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3099 01 71672309 71673422 Dod01g3099 01 71672309 71673422 ECH