Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3085 ATGGTGGAAACAAGACGCAGCTCTTCCTCCTCTTCCTCTTCTTCTTCTTCAAAGCGCACTCTTTCTCCGCCTTCTCAACCCAGAGCCAAACGATCCAAGGTGACCCAAGAGGCCACGTCAGCAGGCCTTCCCTCCCAGGAGATTCTTGATGGGGCAAACGTATCTGGGAACAGATCTGATGAACCGGAGCTACGTCCCTCTGATCTGCAAGAAACGGGTTTGTTGAAGAACGTTGTAAACGTTTGTGATGAAAAGTCTCCTTCTTTGCCCGTTGAAGACGAAGCTATGGCGTCGCCGGAATCTTTTGGCGTTAAAGAAGAAGCGGAGAAATGCCCTGCGGATGCAGCCCCGGAGGAGGTTGCTTGGGGGAAGCTCATTTCCCAGTGTTCGCAGAATCCTCACATGCCCATGTGTGATCCTGTCTTCACAGTTGGTCAAGGCCGTCAGTGTCATTTATGGCTTAATGATCCAGCTGTTAGTAATGTTTTGTGCAAGTTGAGACACATAGAGCGTGGAGGTTCGTCTTTTGCATTACTGCAAATCACAGGGGGTAAAGGTGGTGTTCATGTTAACGGCAAGACTTTTCAGAAGAAGGTCTGTCTGATTTTAAGCGGAGGTGATGAGGTGGTCTTCAATTCTTATAGCAAGCATGCTTATATATTTCTGCCGCTTACCAATAGTAATGCTACTACTGGCATGCCTTCTATGAGAATTTTAGAATCCCAGAGTGATCTGACAAGGGGAATGCATGTTGAAGCCAGAACTAGTGACCATACAGCTGTTGATGGAGCATCAATGTTGGCCTCTTTGTCTAATCTTCATAAAGATATATCTCTTGTCACTCCTCCTGCTAAAACTGGCAACAATGTCCAACAGAAGCCTGAGGTTTCATTGCCACCTTCTGGCACTGCAGACGATATTCCAGACAATGCTGTGAAGGATGGCATCAATAATAATGAACCAGCTGGAGTTGGTCCGGCTGAGAAAACTGATCCTGTATCCATTAATGTCAGCAGGCCATCTCAGCAGATGTTTGCTGTCTCAGTTCCTGAATCTGCTAGCATTTCCAAGATATCAGGAGAGAGAAATCAGTCAAGTGAACTAATCCATAAGTATCGTGATGCCCAGACAGTACTGGCATCTACTATGCGGCAAGCATTGAAGGACAGTTTATTAAAAGGAATTCTCAATCCTGACGATATTGATGTGTCTTTTGAAAGTTTCCCATATTATCTAAGTGATGCAACGAAGGATGTTTTGATCGCTTCTACACATGTTCATCTGAAATGCAATGGCTTTGGAGAATATGCTTCAAACCTCCCGTCAATGTCCCCACGGATATTCTTATCTGGTCCCGCAGGTTCCGAAATATATCAGGAAACTTTGTCCAAGGCACTTGCTAAGCATTTTGGTGCTAAGCTACTAATTGTGGATTCCCTTTCACTTCCTGGCGGAACACCATTAAAGGAAGTGGACTCTGGTAAAGAAAGTTCAAGTCCTGAAGGAGCATCTGCATTTACAGAGAGAATTACCCAGGCTGCCACACTACCACATAAGAAACCAGTCCCTTCTGTAGATGCTGGAATTACTCGTGGATCCACATTCAGTTCTCGGGAGATGCTGCAGCAAGAGGCTTTTACTGCATTATTGAAACGCGCTATTCTTAAGACAGGTGATCGAGTAAAATTTGTTGGTAACATTCCTTCTGTCTCATCACCACAAGGTTATCCTGCTAGAGGACCAAGCTATGGCTCCCGGGGTGAAATTCTCCTTGCATTTGAAGATAATAAGTTCTCAAAAATTGGGGTTAGGTTTGATGAATCAATTCCAGATGGAAATGATCTTGGAGGCCTTTGTGAAGGTGATCATGGCTTCTTTTGTTCTGCTAATCATTTACTACTAGATGGTTCTGGAGGGGATGACTTTGACAAGATTGCAATTAATGAAATCTTTGAGGTTGCCTCTGGGGAGAGTAGAAGTGGTGCACTAGTGGTGTTCATTAAAGATATTGAGAAGGCGATGGGTGGTAACTCTGACATTTTGAAAAGTAAACTTGAATGCCTACCGCAGAATGTTGTCGTAATTGGCTCACATACCCAGCAGGACAGTCCAAAGGAGAAGAATCAACTTAGTGGCTATCTATTGTTGGGGAGCAATCAGGCAGCAATGCTTGATATTTCTTGCCCGCATAAGTTCGCTAGACTGCATGATGGGAGCAAAGAAAGTCCCAAAGTAATGAAGCAGCAACTTAGTCAACTTTTCCCGAATAGAGTGCCAATAAAGCTGCCTCAGGATGAAGTTTTACTTTCTGATTGGAAGCAGCAGTTGGATCGTGACATTGAAACTATGAAAGCTCAGTCCAACACTGTCAGCATTCGCTCAGTTCTTAACCGAATTGGACTGGATTGCCCTGACCTTGAGACTCTCTGCATTAAAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAATCATTGGCTGGGCTATAAGTTACAAATTTATGTGTTCATCTGAAGGTTCTATCCAAGACTCTAAGCTTGTGTTATCTACAGAAAGCATTAAGTATGGGCTGAGCATTTTACAGGGCATTCAAAATGGAAGCAAGAACGTAAAGAAATCACTGAAGGATGTAGTTACTGAGAATGAATTTGAGAAAAAACTGCTTGCTGAAGTTATTCCACCAGCTGATGTTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTCATGCTTCCGCTTCAGAGACCTGAGTTGTTTAGGAAAGGACAGTTGACTAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGTACAGGAAAGACAATGCTTGCAAAGGCAGTAGCAACTGAGGCTGGAGCAAACTTTATTAACATTTCAATGTCCAGCACTACTTCAAAGGTGTTAATGTTACTAATTGGGAAATTTTTGTACGGTCTATGTTACACTATGGTGAAAGAGTACATAATAATTTTGTTTTTTCAGTGGTTTGGAGAAGCAGAAAAATGTGTCAAAGCTATCTTTTCTTTAGCCAGCAAAATTGCCCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTGGGAAGACGTGAAAATCCTGGTGAACATGAGACAATGCGCAAACTGAAGAACGAGTTTATGGTAAATTGGGATGGTTTGCGAACCAAAGACAACGAGCGTGTGCTTGTTCTTGCTGCTACAAACAGGCCCTTTGATCTTGACGAGGCTGTTATCAGGAGGCTTCCGCGGAGATTGATGGTTAATTTGCCAGATGCTCCGAACAGAGAAAAAATTCTCAGGGTCATCTTAGCAAAAGAAGATTTGGCATCTGATGTTGATTTGGAAGCAATAGCAAATATGACTGACGGATATTCTGGGAGTGACCTAAAGAATCTATGTGTGACAGCAGCTCATTGCCCAATAAGAGATCTCTTGGAGAAAGAAAAGAAGGAGAGAAGTTTAGCCTTGGCAGAGAACAGACCTTTACCTGGATTATATAGCAGTGCTGAAATCCGTTCCTTAAAGATGGATGATATTATATATGCACATGAGCAGTTGGGCGCGAGTGTATCGTCGGAATCATCCAATACGAATGAGCTACTTCAATGGAATGACCTTTATGGAGAAGGTGGATCGAGAAGAATGAAATCCTTGAGCTATTTCATGTAA 3699 0.4307 MVETRRSSSSSSSSSSSKRTLSPPSQPRAKRSKVTQEATSAGLPSQEILDGANVSGNRSDEPELRPSDLQETGLLKNVVNVCDEKSPSLPVEDEAMASPESFGVKEEAEKCPADAAPEEVAWGKLISQCSQNPHMPMCDPVFTVGQGRQCHLWLNDPAVSNVLCKLRHIERGGSSFALLQITGGKGGVHVNGKTFQKKVCLILSGGDEVVFNSYSKHAYIFLPLTNSNATTGMPSMRILESQSDLTRGMHVEARTSDHTAVDGASMLASLSNLHKDISLVTPPAKTGNNVQQKPEVSLPPSGTADDIPDNAVKDGINNNEPAGVGPAEKTDPVSINVSRPSQQMFAVSVPESASISKISGERNQSSELIHKYRDAQTVLASTMRQALKDSLLKGILNPDDIDVSFESFPYYLSDATKDVLIASTHVHLKCNGFGEYASNLPSMSPRIFLSGPAGSEIYQETLSKALAKHFGAKLLIVDSLSLPGGTPLKEVDSGKESSSPEGASAFTERITQAATLPHKKPVPSVDAGITRGSTFSSREMLQQEAFTALLKRAILKTGDRVKFVGNIPSVSSPQGYPARGPSYGSRGEILLAFEDNKFSKIGVRFDESIPDGNDLGGLCEGDHGFFCSANHLLLDGSGGDDFDKIAINEIFEVASGESRSGALVVFIKDIEKAMGGNSDILKSKLECLPQNVVVIGSHTQQDSPKEKNQLSGYLLLGSNQAAMLDISCPHKFARLHDGSKESPKVMKQQLSQLFPNRVPIKLPQDEVLLSDWKQQLDRDIETMKAQSNTVSIRSVLNRIGLDCPDLETLCIKDQALTTESVEKIIGWAISYKFMCSSEGSIQDSKLVLSTESIKYGLSILQGIQNGSKNVKKSLKDVVTENEFEKKLLAEVIPPADVGVTFDDIGALENVKDTLKELVMLPLQRPELFRKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSTTSKVLMLLIGKFLYGLCYTMVKEYIIILFFQWFGEAEKCVKAIFSLASKIAPSVIFVDEVDSMLGRRENPGEHETMRKLKNEFMVNWDGLRTKDNERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLASDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIRDLLEKEKKERSLALAENRPLPGLYSSAEIRSLKMDDIIYAHEQLGASVSSESSNTNELLQWNDLYGEGGSRRMKSLSYFM* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3085 1232 MobiDBLite consensus disorder prediction 1 72 - -
Dod01g3085 1232 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 352 976 - -
Dod01g3085 1232 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 333 - -
Dod01g3085 1232 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1004 1232 - -
Dod01g3085 1232 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1004 1232 - -
Dod01g3085 1232 MobiDBLite consensus disorder prediction 283 298 - -
Dod01g3085 1232 SUPERFAMILY SMAD/FHA domain 122 216 IPR008984 GO:0005515
Dod01g3085 1232 ProSitePatterns AAA-protein family signature. 1071 1090 IPR003960 GO:0005524|GO:0016887
Dod01g3085 1232 CDD AAA 938 1099 - -
Dod01g3085 1232 Pfam AAA+ lid domain 1121 1156 IPR041569 -
Dod01g3085 1232 Pfam ATPase family associated with various cellular activities (AAA) 940 1097 IPR003959 GO:0005524|GO:0016887
Dod01g3085 1232 MobiDBLite consensus disorder prediction 1 43 - -
Dod01g3085 1232 SMART AAA_5 936 1101 IPR003593 -
Dod01g3085 1232 CDD FHA 139 221 IPR000253 GO:0005515
Dod01g3085 1232 Gene3D - 1100 1194 - -
Dod01g3085 1232 Gene3D - 898 1205 IPR027417 -
Dod01g3085 1232 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 352 976 - -
Dod01g3085 1232 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 333 - -
Dod01g3085 1232 MobiDBLite consensus disorder prediction 283 304 - -
Dod01g3085 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 899 1204 IPR027417 -
Dod01g3085 1232 Gene3D - 121 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3085 Dod-Chr1 71532148 71544237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3085 899 1216 Calmodulin-binding Proteins AT3G56690 33.127 1.26e-37 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3085 - - gmx:100801477 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3085 01 71532148 71544237 Dod01g3085 01 71532148 71544237 ECH