Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod01g3061 | ATGGAGGTCTCGAACGATGATTTCATGGAGGTGCAGATTGGGAATTCCGTGGAGTCATTGCAGCGGTTTTTGGCTTCTCAGAGAGAGCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAGTGCAAACTCACCGGCGTCAATCCTCTATCTCAAGAAATGGCAGCTGGTGCTCTTTCAATAAACATTGGAAAAAGACCTAGGGATTTATTAAACCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGCAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTGTCACAGTAACACAGGTTCGTGACTTTTTCACTAGTCAACGCTCTAGAGTGAGGAGATTTGTTCAGTTGTCAAGGGAGAAGGCGTTAAGATCTAAGTCTTGTGAAGAACCTCATGATGGGCAAATTAACTCTGATCCTATGATACCAGTAAATCCAGCTCCCTTAAACTCTGCTGTCCCCACTAACACTCAAGAAACATCTTGTTCAACACAGGAGGCAGCTTTGTCTGACCTAAATGACTTAGATAAACAATTTGTTGATAACATTTTTAGTCTAATGGAGAAAGAGGAAACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGACAATACAGAATTTGTCAGTATTGTTGTGGTTTTTGACCAGAGGAGGTGTGGTGACTTTAGCAACTTGGCTGAGTAAAGCAGCTGTTGAAGAGCAAACAAGTGTCCTTATTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCTTCCTACACACATATCAGCTATATTGCAGAGTGTTAATAAACTGCGGTTTTACAGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCACGTGACCAAGCGATGAAGAAACCCAATGGTGTTAAACTTTCTGGTGATGGTCAAAAAGAGAAAATGCTTTCTCAGAGTATTGGTCAAATTATGGGCTCTGAATTGTGGGACTCAAATATTCATGTTCCTGAGGACATTCTCGCTCTCTCAAATGATCATTCAGATAATTTCAGGAAACTAGAAGCTTCCCAAGCTGTGAAATTGTTGCCACCCACCTCAGATGATTCTAATAAGAAGCCTGCCCTTGGTGTATCTTCATCTCAAATGAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGCCAGAAATCGGTGAACAGAAGCCCACAGGTGACAAGAGTAGGGCCTGTAAATCAAGGCCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCGTTATTTATGCAGAGTAAGTATGGGAAACCTGGTTCTTCAAAAGAAAGTAAAGAAGCAAAGTTCGATGGTCTGCAAAAACGTCAAACAAATCAGGCCGGTATTGCGGCTTGCTCTTCTAAAGTTCCTATTCCACCCAAAATTGAAGAGGACAAGAAATCTCTGTTGCTTCCCTCTAATAAGACCAGTAATAGGGTGGGAGCTTCTTATTCTAAACCGAAAATGGATGCAAAGGAACCTCTCTGGGAGAAATGCAAGAGGGTGCAAATCCCATGGAACACACCAGCAGAAGTTAAACTCGTAGATACCTGGAGAGTTGGTGCTGGTGAAAATAGCGAAGAGGTTGATGTCCAGAAGAACAGAAACAGCAGGGAGAAGGAAACTGTTTATCATACTGTCCAAGAGATCCCATCCAATCCCAAAGAGCCATGGGACCTCGAGATGGGCTATGATGACACTTTGACACTGGAAATTCCTATTGAACAGCTTCCAGATGTTGATGGTGCAGAAACAGCAGTTGCCCCCAGTCAGGTTTCAACACATGCTGTGCAAGGGGTCGCCACCACATCTTCAACCAGTAATGTAGCTACTGCTGAACCAGATTTAGAGCTGCTTGCCGTGTTGCTGAAAAATCCGGAGTTGGTATTTGCCTTAACTTCCGGACACCCTGGTAGCATACCGAGTCAGGAAACTGTGAAGTTGCTTGACATGATCAAGAGAGGTGGTGTGAACTCAGGTTCAAATGAAAATACAATTGGCAATGGCATGAGTGCAAAGGTCACTGAGAAGGTGGAAGTTTCACTTCCATCGCCAACTCCTTCAAGTGATCCAAGAACGAGTGGATGGAGCACAATAGCATCAAAGAATCCTTTTTCAAAGCAAAGCTTAGCACCTGATAGAATTATCAACAGCTCCCCGGCAATGGCAACTGCCAATATAGTATCTCAGATTCCGGCAACTGGCGCAACAATAAGGCAGCAACCTGCACTGGTGCTTCCATCTTCAAGGCCCCTCAACGGAACAACAGTTTCTCCATATCCACTGCCTCAGGCAACTAACGCTGTTCCTGAAAGGCAACCACAACCCCTCGCTCATTCCTCTGTGCATGTACAAACACCATCCTCGGATATAGGTTTAACCATGAAGAAAAACATAATGAGCTGCAAATGCATCTTCTTCAGTTAA | 2508 | 0.4342 | MEVSNDDFMEVQIGNSVESLQRFLASQRELFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSINIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFTSQRSRVRRFVQLSREKALRSKSCEEPHDGQINSDPMIPVNPAPLNSAVPTNTQETSCSTQEAALSDLNDLDKQFVDNIFSLMEKEETFSGQEKLMEWILTIQNLSVLLWFLTRGGVVTLATWLSKAAVEEQTSVLILILKVLCHLPLHKALPTHISAILQSVNKLRFYRTSDISNRARVLLSKWSKLLARDQAMKKPNGVKLSGDGQKEKMLSQSIGQIMGSELWDSNIHVPEDILALSNDHSDNFRKLEASQAVKLLPPTSDDSNKKPALGVSSSQMRERRKVQLVEQPGQKSVNRSPQVTRVGPVNQGRPMSADDIQKAKMRALFMQSKYGKPGSSKESKEAKFDGLQKRQTNQAGIAACSSKVPIPPKIEEDKKSLLLPSNKTSNRVGASYSKPKMDAKEPLWEKCKRVQIPWNTPAEVKLVDTWRVGAGENSEEVDVQKNRNSREKETVYHTVQEIPSNPKEPWDLEMGYDDTLTLEIPIEQLPDVDGAETAVAPSQVSTHAVQGVATTSSTSNVATAEPDLELLAVLLKNPELVFALTSGHPGSIPSQETVKLLDMIKRGGVNSGSNENTIGNGMSAKVTEKVEVSLPSPTPSSDPRTSGWSTIASKNPFSKQSLAPDRIINSSPAMATANIVSQIPATGATIRQQPALVLPSSRPLNGTTVSPYPLPQATNAVPERQPQPLAHSSVHVQTPSSDIGLTMKKNIMSCKCIFFS* | 836 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod01g3061 | 835 | MobiDBLite | consensus disorder prediction | 703 | 731 | - | - | |
| Dod01g3061 | 835 | MobiDBLite | consensus disorder prediction | 447 | 466 | - | - | |
| Dod01g3061 | 835 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 229 | 317 | IPR035441 | - | |
| Dod01g3061 | 835 | ProSiteProfiles | 'Homeobox' domain profile. | 66 | 126 | IPR001356 | GO:0003677 | |
| Dod01g3061 | 835 | MobiDBLite | consensus disorder prediction | 374 | 430 | - | - | |
| Dod01g3061 | 835 | Gene3D | - | 68 | 125 | - | - | |
| Dod01g3061 | 835 | SMART | HOX_1 | 68 | 130 | IPR001356 | GO:0003677 | |
| Dod01g3061 | 835 | PANTHER | HOMEOBOX PROTEIN LUMINIDEPENDENS | 1 | 825 | - | - | |
| Dod01g3061 | 835 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 226 | 312 | IPR035441 | - | |
| Dod01g3061 | 835 | SUPERFAMILY | Homeodomain-like | 68 | 129 | IPR009057 | - | |
| Dod01g3061 | 835 | MobiDBLite | consensus disorder prediction | 708 | 731 | - | - | |
| Dod01g3061 | 835 | MobiDBLite | consensus disorder prediction | 406 | 424 | - | - | |
| Dod01g3061 | 835 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED | 1 | 825 | - | - | |
| Dod01g3061 | 835 | CDD | homeodomain | 69 | 125 | IPR001356 | GO:0003677 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod01g3061 | 481 | 736 | Homeobox Transcription Factor Family | AT4G02560 | 49.225 | 8.17e-51 | 191 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod01g3061 | - | - | adu:107492506 | 1227.62 |