Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3058 ATGGTGGAGAGGAGGAAGCCCCTCGTACTCTCTTCCACCAAACACCTCATCACCTCCTTGCTCACCTCTTCCTCCCCAACCGACAACCCAAACACCAATGCCCTCTGCAGCCACCATGACGATTCTTCCTCCACCACCTTCAACTTACCTGCGGGGATTCTCCGATTCTCCAACCACCCCAATCATCATCTTCAATTCCCTTCTCTTGACGATTCTGCCCTCGTTGGCCTCTCCACTTCTCTTCTCAAAAGGCTCTCTGTCACTTCTGGCTCACTGGTTCTGGTGAAGAATGCTGAGATGGGTATGCAGAGAGTTGCTGTGGCCATTGCTCTGGATCCTCCAAGGACCACTACCCCTGAGCCTGATTCTGATTCAAATTTATCCTCATCCTCTTCTTCTCAGTGTTCTAGAATTATGCTTGCGTTTCCTTCTTGTGATTTCCCTCCTAGTGGGACCTTGTTGTTCGATCATGAAGTTGCTTATCTGTCTCCTCTTTTAGCCTTTAATCTTAGCTTGCACATGTCATGCTTGAAATCCATTCTACAACTTGGGGAAGACACTTTGGCTTCTTATTTCAAGCCTGGAGGGGGTGATGAGGATGCCGCAAAAAGCATTATGGATTCTGTCATCAACATTGAGTTAGCACCTTTTGCTCAAGCTCCAAGGTTTGCCTCACATTTAAGGGTTTCTTTTGTGAAGTTGCCAGAATGTGGCATACTTGAATCTATTAGAGAAAGTTCACCTATTGAATCCAATGAACGGCAAGACATGATTGACTTGGCATTACAGAAGTACTTTGAAGTTGATAGATATTTGTCAAGAGGAGATGTTTTTGGGATCAAGATAAATTGGAATTGCAATTCCACTATTTGCGTTCCATGCAACCAAAAGTCACAAAAGAAAAATGACAACCTTATCTATTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAGTTCTTCGTGTCAATAGAACCTTAACTGCTTTGGTGCTAGGAGGGAGTTCCCCCTCTGCCCTTCCTCCAGATTTATTAATTGCCGGGCCAGAAGGGCCTGTGCCCTTGCAAGGAGACACAGTAAAGATATTGGCTTCAATACTTACACCAACTTTCTGTCCATCAGTACTTTCTTCAAAATTCAGAATTTCAGTTCTATTGTATGGCTTGGCAGGGTGTGGGAAGAGGACTGTAGTTAGATATGTTGCTCGTAGACTGGGCCTGCATGTGGTGGAATATAACTGTCATGATCTGATGAGATCTGAGAGAACATCTGTTACTCTAGCTCAAGCTTTCAAGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTTCGCCATTTTGATGTTTTTCGAGATTCACATTCGCCTGAGGGTTCACTAAATGATCAAAGAGGCAATACATCTGAAGTTGCATCCGTTATCAGGAAATTCACTGAACCAGTTAGTGAACATGGTGATAGCAACTCCCAGCAGAAATCAAATGGTGAATTTGTTGAGAAGAATGTTGAAAAGACAAGCGTGCATCAGGTCCTGTTGATTGCTGCTGCTGACAGTTCTGAAGGTTTACCTTCAACTATCAGACGCTGCTTTAGCCATGAAATAAGTATGGGGCCTTTGACTGAAGAGCAAAGGGTTGAAATGCTATCCCAATCACTGCAAAGTGTTTCCAGGCTCCTCTCTAATACAGATTCAGAGGGTTTTATAAAAGAAATAGTTGGACAGACATCTGGTTTTATGCCCAGGGATATGTGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGCAGCAATGCTGAAGTAGACAAAGATAGGCCTAAGGATGAAGATGGTTCTCTTAGTCCAAAAGTGATGGAGGACAAGGACTGGAAAGTTTCGCCTCAAATTCCTGGGAAAGAAGACTTGATGAAAGCTTTGGAACGATCAAAGAAACGAAATGCATCAGCATTGGGCACTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCCTGCACAAAGATTTGTTTTCATCTGGATTACGTAAGAGGTCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTAAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAGAAGAATGTTCGAGACATTTTCCAGAAGGCCAGATCAGCACGTCCATGTGTTATCTTCTTTGACGAGCTTGATTCTCTAGCACCAGCTAGGGGTGCTTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCGGAGATCGATGGCTTAAGTGATTCTACCCAGGATCTGTTTATTATTGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTTTACGCCCTGGCCGATTTGATAAGCTGCTATATGTTGGAGTTAACACTGAGGCATCTTATAGGGAGCGGGTCTTGAAAGCACTTACCCGAAAGTTTAAATTGCATGAAGATGTTTCACTGTACTCTATAGCTAAAAAATGCCCTCCAAACTTCACCGGTGCAGACATGTATGCCTTATGTGCAGACGCTTGGTTCCACGCTGCAAAGCGCAAGGTTTCAAGTGCAAATCCCGAGTCTTCTAGCCAAGATAATGATGCAGATTCTGTTGTTGTTGAGTACAATGACTTTGTCCAGGTCTTAGGAGAGCTGCCACCTTCCCTCTCTATGGCTGAGCTTAAGAAGTACGAGCAACTTAGAGATCAGTTTGAGGGCACCTCTAAATAA 2835 0.437 MVERRKPLVLSSTKHLITSLLTSSSPTDNPNTNALCSHHDDSSSTTFNLPAGILRFSNHPNHHLQFPSLDDSALVGLSTSLLKRLSVTSGSLVLVKNAEMGMQRVAVAIALDPPRTTTPEPDSDSNLSSSSSSQCSRIMLAFPSCDFPPSGTLLFDHEVAYLSPLLAFNLSLHMSCLKSILQLGEDTLASYFKPGGGDEDAAKSIMDSVINIELAPFAQAPRFASHLRVSFVKLPECGILESIRESSPIESNERQDMIDLALQKYFEVDRYLSRGDVFGIKINWNCNSTICVPCNQKSQKKNDNLIYFKVIAMEPSDEPVLRVNRTLTALVLGGSSPSALPPDLLIAGPEGPVPLQGDTVKILASILTPTFCPSVLSSKFRISVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMRSERTSVTLAQAFKTAQRYSPAILLLRHFDVFRDSHSPEGSLNDQRGNTSEVASVIRKFTEPVSEHGDSNSQQKSNGEFVEKNVEKTSVHQVLLIAAADSSEGLPSTIRRCFSHEISMGPLTEEQRVEMLSQSLQSVSRLLSNTDSEGFIKEIVGQTSGFMPRDMCALIADAGANLFPSSNAEVDKDRPKDEDGSLSPKVMEDKDWKVSPQIPGKEDLMKALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNTEASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSSANPESSSQDNDADSVVVEYNDFVQVLGELPPSLSMAELKKYEQLRDQFEGTSK* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3058 944 Pfam ATPase family associated with various cellular activities (AAA) 698 830 IPR003959 GO:0005524|GO:0016887
Dod01g3058 944 Pfam ATPase family associated with various cellular activities (AAA) 384 535 IPR003959 GO:0005524|GO:0016887
Dod01g3058 944 SMART AAA_5 380 540 IPR003593 -
Dod01g3058 944 SMART AAA_5 694 833 IPR003593 -
Dod01g3058 944 MobiDBLite consensus disorder prediction 111 131 - -
Dod01g3058 944 MobiDBLite consensus disorder prediction 601 618 - -
Dod01g3058 944 CDD AAA 692 830 - -
Dod01g3058 944 Gene3D - 358 560 IPR027417 -
Dod01g3058 944 PANTHER AAA-FAMILY ATPASE 31 940 - -
Dod01g3058 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 657 938 IPR027417 -
Dod01g3058 944 MobiDBLite consensus disorder prediction 597 618 - -
Dod01g3058 944 CDD AAA 383 444 - -
Dod01g3058 944 Gene3D - 832 918 - -
Dod01g3058 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 602 IPR027417 -
Dod01g3058 944 Gene3D - 656 933 IPR027417 -
Dod01g3058 944 PANTHER PEROXISOME ASSEMBLY FACTOR 2 31 940 - -
Dod01g3058 944 ProSitePatterns AAA-protein family signature. 801 819 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3058 Dod-Chr1 71265402 71272578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3058 664 901 Calmodulin-binding Proteins AT3G56690 38.912 6.83e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3058 K13339 - gmx:100820183 1442.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0809 07 11564883 11565842 Dod01g3058 01 71265402 71272578 PCT