Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3057 ATGCAGAACAAGGAGAACTTTGCAAAGCTTTCTGAGGAGATTAAGGAAATGGGGTTTGATCCAAGAAAGACAATGTTTGTGTTGGCCATTCATGTGCTCTCAGGTGAAGGTAACAAGTCAATTTATAACCGATGTTATGAGGTTTATCAGAGGTGGGGTTGGTCAGGTGATGACATTCTTTTGGCGTTCAAGAAGCACCCACATTGCATGATACTGTCTGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAACAAGATGGGTTGGCCTTCAGGTATGATTGTTAGGTCCCCGGTGGTGTTGTTTTTCAGCTTGGAGAAGAGGATTAAGCCTAGGTGCTCGGTTGTTAAGACCTTGTTGATGAAAGGGTTGATTAAGAGGACTTTGAGCTTGAGTACTTTTCTTTTGCCTGAAGAGAGCCGTTTTTTGGAAAAGTTTGTGATCAAGTATGAACACCATGTGCCTCAGTTGTTAAGTGTGTACCAGAGAAAGATAGATTTTAAGAGTGTGATTTGA 519 0.4123 MQNKENFAKLSEEIKEMGFDPRKTMFVLAIHVLSGEGNKSIYNRCYEVYQRWGWSGDDILLAFKKHPHCMILSEDKIMKTMDYLVNKMGWPSGMIVRSPVVLFFSLEKRIKPRCSVVKTLLMKGLIKRTLSLSTFLLPEESRFLEKFVIKYEHHVPQLLSVYQRKIDFKSVI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3057 172 Pfam mTERF 39 143 IPR003690 GO:0003690|GO:0006355
Dod01g3057 172 SMART mt_12 92 126 IPR003690 GO:0003690|GO:0006355
Dod01g3057 172 SMART mt_12 60 91 IPR003690 GO:0003690|GO:0006355
Dod01g3057 172 Gene3D Transcription termination factor 3, mitochondrial 2 160 IPR038538 -
Dod01g3057 172 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 2 165 - -
Dod01g3057 172 PANTHER CGI-12 PROTEIN-RELATED 2 165 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3057 Dod-Chr1 71263385 71263955 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod01g3057 mTERF 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3057 K15032 - qsu:112019279 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3057 01 71263385 71263955 Dod01g3057 01 71263385 71263955 ECH