Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3056 ATGAAAGCAATCCAGACACCAAGGTTGTATTATGCCGCATTTCACTCCACGAAACCGAAGCAATCCATTGGAGATTCATCATGCACACACACACTACCCCTCACGAACCGATCACTCTGCAAACCAATCTCCTGCAAGGTCCAAACGAACCAGCCCTGTTTCACCATCTCTTACCTCATTGACTCATGTGGACTCTCTCCAGACACTGCTGCTTTGACTTCCCAAAAGCTTCACCTTCCTTCTGCTGAAAGACCAGACTCTGTTCTCACCCTTCTCAGAGAATTTGGCTTCTCAAATACCCAGATCTCAAATATCATCAGAAAACGTCCATTGCTTCTTTTGGCCAACCCAAAGGACATTCTTTTGCCAAAGCTTCAATTTTTCCTTTCCATTCGGATTTCCAACTCTGACCTTGCAAGAATCCTAACTGCTGACCCTACCCTTTTGACCAGGAGCTTGGAGAATCAGATTATACCCTCTTACAATTTCCTCAAGAGTGTGTTGCTTTCCTGA 513 0.4503 MKAIQTPRLYYAAFHSTKPKQSIGDSSCTHTLPLTNRSLCKPISCKVQTNQPCFTISYLIDSCGLSPDTAALTSQKLHLPSAERPDSVLTLLREFGFSNTQISNIIRKRPLLLLANPKDILLPKLQFFLSIRISNSDLARILTADPTLLTRSLENQIIPSYNFLKSVLLS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3056 170 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 38 169 - -
Dod01g3056 170 Gene3D Transcription termination factor 3, mitochondrial 68 170 IPR038538 -
Dod01g3056 170 PANTHER CGI-12 PROTEIN-RELATED 38 169 IPR003690 GO:0003690|GO:0006355
Dod01g3056 170 Pfam mTERF 89 167 IPR003690 GO:0003690|GO:0006355
Dod01g3056 170 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Dod01g3056 170 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3056 Dod-Chr1 71262594 71263312 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod01g3056 mTERF 5.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3056 K15032 - ahf:112805356 200.675