Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3001 ATGACCGCTGCAAGATCTGCCTTGAGGACCCTTCCTTTGGCGACCTCCTCGCCGCTTGATTCGTTTACCCTGGCCAGTGCAACGCCGCCATCATCGAGCCCAGCCTCCACTCCTCGCGCTACTTTGTCCTCAAGATCGAGGATGGTAGGGGCCATCCGCAGAAAGACCACTAGGACTGGTGGGACGAGGTACTTGCGCCACTTACCTCGCCGATTCAAGAGCAGCTTCAGAGAAGAAGATGGAATATCTCCAAATCATGCTTTTTCTAATGGCAAAGATATTCAGAGTGAAGTTGGGAAATTGAACATTTTATCCTCTATGGCTATTGGAGTACTGCAAGAAATAGGCAGGTGGTGTTGCTCTAAGTTTGCTAGCATTGGTCAAAAGGTACAAACATAG 399 0.4962 MTAARSALRTLPLATSSPLDSFTLASATPPSSSPASTPRATLSSRSRMVGAIRRKTTRTGGTRYLRHLPRRFKSSFREEDGISPNHAFSNGKDIQSEVGKLNILSSMAIGVLQEIGRWCCSKFASIGQKVQT* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3001 132 MobiDBLite consensus disorder prediction 22 44 - -
Dod01g3001 132 Gene3D - 21 82 IPR011331 GO:0003735|GO:0005840|GO:0006412
Dod01g3001 132 MobiDBLite consensus disorder prediction 22 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3001 Dod-Chr1 70711101 70712611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3001 49 84 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 63.889 2.41e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3001 K18998 K02922 gmx:100811605 64.3142