Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2989 ATGGAGAATGCAAATTCATCATCAACATCAGGATTAGCTAGAACGAAATCGGATCAGCTAGTGGAATCGATTGTAGCCGCAGTGATGAACAAGTCATCATCGCCGGCATCAAATGAATCGACGGCGGAAGGTAGTGGAAACCTGTCGAGGAAATCGAGCCGGAGGATGATGGGGGCGTCGCCGGGGAAGAGCACACACATAAGGAAGTCAAGGAGCGCGCAGTTGAAGGTTGAGGTGGACGAGGTTAGCAGTGGCGCTGCTCTTAGCCGAGCCTCAAGCGCCAGCTTGGGCCTCTCATTCTCCTTCACTGGCTTCACTCTTCCCCCTGATGAAATCGCCGACTACAAGCCCTTCAGCGATGATGATATCCCGGAGGATATTGAAGCTGGGACTCGTAAGCCAAAGTTTCAAACGGCACCTACTGATCTGCCAATATATCTAAAGTTCACGGCTGTGAGCTATAAGGTAGTGATCAAAGGCATGACGACAAGTGAGGAGAAGGATATCTTGAAGGGTATCACTGGTTGTGTGAATCCAGGGGAAGTTTTGGCACTGATGGGCCCCTCAGGAAGTGGAAAGACATCTCTGTTGAATCTGCTTGGAGGCAGGATAAGTCAGCCCACGGTTGGTGGATCTATCACCTACAATGATCAGCCATATTCCAAGTTCCTAAAGAGCAGGATTGGATTCGTGACACAAGATGATGTTCTGTTTGCTCACCTAACTGTAAAAGAAACTTTGACATACGCGGCCCGCCTAAGATTGCCAAATACATTAACGCGAGAGCAAAAGGAACAAAGAGCTTTAGATGTCATCTGTGAGCTGGGATTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTTTGTTCGTGGAGTATCTGGCGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATTATAATCAATCCTTCTCTTCTTCTTCTTGATGAACCGACTTCTGGTTTGGACTCTACAACAGCCTTGAGGATCGTTCAGATGCTACAAGACATAGCAGCGGCTGGTAGAACTGTAGTGACAACAATCCATCAACCATCAAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGCCTACTTCCAGTTTATAGGGTGTTCCCCTCTCATTGCCATGAACCCAGCAGAGTTTTTACTAGACCTTGCCAATGGAAACATAAATGATGTTTCTGTACCATCAGAGTTAAAGGATAAAGTGCAAATTGGGAATTCAGAAGGTGAAACATGTAACGGGAAACCATCACCTGCAGTTGTGCAAGAGTATCTGGTGGAGGCATATGAGACTAGTGTTGCTGAAACAGAAAAGAAAAAGCTAATGGATCCAATCCCTCTTGATGAAGAACTGAAGTCCAATGTTCTTTCTACCAGAAGACAGTGGGGAGCAAGTTGGTGTGAGCAATACTGCATATTATTTTCAAGGGGATTCAAAGAAAGGAAGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTATCCACTGCAGTCATCTTAGGATTACTGTGGTGGCAGTCAGATGCTAACAGTCCAAAGGGGCGGCAAGACCAGGCAGGACTGCTTTTCTTTATTGCTGTATTTTGGGGATTCTTTCCTGTGTTCACCGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGACTAAGGAAAGAGCAACAGATATGTACAGGCTAAGTGCATACTTCGTGGCAAGAACTACAAGTGACCTTCCACTAGACCTGGTCCTACCAGTGCTTTTTCTCCTCGTTGTTTACTTCATGACTGGTTTGAGACTCAGTCCAGGACCCTTTTTCCTTAGCATCCTCACAGTCTTTCTTTGCATAGTGGCAGCTCAGCAGGGACTTGGACTTGCTATTGGGGCTACACTGATGGAGTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTTATGACTTTCATGTTGGCTGGAGGTTTTTTTGTTAAGAAAGTCCCAATATTTATATCTTGGATTCGATACATATCTTTCAACTACCACACATACAAACTTCTGCTGAAGGTGCAATATGAACACATGAGACCTGCTACCATAAATGGGATCAGAATTGACAGTGGTTCAACAGAGGTGGCTGCTCTGATAGCCATGGTCTTCGGTTACCGTTTATTGGCATATCTTTCTTTGCGGAGGATGAAACTTCACTCCGGAGCTTAA 2238 0.4513 MENANSSSTSGLARTKSDQLVESIVAAVMNKSSSPASNESTAEGSGNLSRKSSRRMMGASPGKSTHIRKSRSAQLKVEVDEVSSGAALSRASSASLGLSFSFTGFTLPPDEIADYKPFSDDDIPEDIEAGTRKPKFQTAPTDLPIYLKFTAVSYKVVIKGMTTSEEKDILKGITGCVNPGEVLALMGPSGSGKTSLLNLLGGRISQPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFAHLTVKETLTYAARLRLPNTLTREQKEQRALDVICELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQDIAAAGRTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMAYFQFIGCSPLIAMNPAEFLLDLANGNINDVSVPSELKDKVQIGNSEGETCNGKPSPAVVQEYLVEAYETSVAETEKKKLMDPIPLDEELKSNVLSTRRQWGASWCEQYCILFSRGFKERKHDYFSWLRITQVLSTAVILGLLWWQSDANSPKGRQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERATDMYRLSAYFVARTTSDLPLDLVLPVLFLLVVYFMTGLRLSPGPFFLSILTVFLCIVAAQQGLGLAIGATLMELKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYISFNYHTYKLLLKVQYEHMRPATINGIRIDSGSTEVAALIAMVFGYRLLAYLSLRRMKLHSGA* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2989 745 Pfam ABC-2 type transporter 488 698 IPR013525 GO:0016020|GO:0140359
Dod01g2989 745 Pfam ABC transporter 170 321 IPR003439 GO:0005524
Dod01g2989 745 ProSitePatterns ABC transporters family signature. 293 307 IPR017871 GO:0005524
Dod01g2989 745 MobiDBLite consensus disorder prediction 27 74 - -
Dod01g2989 745 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 15 739 - -
Dod01g2989 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 386 IPR027417 -
Dod01g2989 745 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 739 - -
Dod01g2989 745 MobiDBLite consensus disorder prediction 27 54 - -
Dod01g2989 745 CDD ABCG_EPDR 144 375 - -
Dod01g2989 745 Gene3D - 147 387 IPR027417 -
Dod01g2989 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 393 IPR003439 GO:0005524
Dod01g2989 745 SMART AAA_5 179 370 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2989 Dod-Chr1 70548131 70556024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2989 169 422 Calmodulin-binding Proteins AT2G36910 29.545 4.17e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2989 K05681 - gmx:100796008 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2989 01 70548131 70556024 Dod07g0348 07 4208559 4222192 PCT