Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2982 ATGCCTCAGCTGAGGCTGTTCAACAAAATGCCTCCACAGCTAGTGAAAATTGACAACAAGGACATGAAGCAAGTTCATCAACAGAGCAAACAGCAGGTCAAAGAGAAAGAAGAACAAACAATGCACATGCAGAAGGAACAAGCTACACCAGCACCAACAACAACAACACAGAGGGAAGAAGCCAGAGTATCAGAGCCAGCAAAACCAAAGATGATCCATAGTACTAGGAGGCTTGCAAGTGCAGGGCTTCGAACAGAGTCTGTTCTGCTGAGCAACACTGGTCATCTTAAGGAACACTACAATTTGGGGCCTGAGCTTGGTCAAGGACAATATGGAACAACTTTCCTTTGCGTGGAGAAAGGCAGTGGGAACAAGTATGCGTGCAAGTCCATTGCAAAAGTGAAGCTGCTGACAGAAGAAGATGTGGAGGATGTGAGGCGGGAGATTCAGATAATGCATCACTTGGCGGGGATGAGTCCCAATGTGGTGTCCATCAAAGGGGCTCATGAGGATGCTGTTGCTGTTCATGCTGTGATGGAACTGTGTGCAGGTGGTGAGCTGTTTGATAGGATTCTGGAGAGGGGCCATTACACTGAAAGAAAGGCAGCTAAGCTTGCAAGGACTATAGTTAGTGTTGTTGAGGCTTGCCACTCCCTTGGAGTCATGCATCGTGACCTTAAGCCTGAGAATTTTCTCTTTGCCGATGGCCGGGAGGACTCTACCCTCAAAGCAATAGATTTTGGAATGTCTGTCTTCTTCAAACCAGGAGAAGTATTCACTGACGTGGTAGGAAGTGCTTACTACATTGCACCTGAAGTTCTACTCAAGCATTATGGTCCAGAAGCAGATGTCTGGAGTGCTGGTGTGATCATATACATTCTCTTATGTGGATCACCTCCATTTTGGGGTGAATCGGAGAAAGAAATATTTCAAGAGGTTTTGCACGGTGATCTTGATTTCTCTTCAGATCCTTGGCCAAATATCTCTGAAAGTGCAAAAGACTTGGTCAGGAAGATGCTTGTTAGAGATCCTAGAAAACGGATTACAGCAGCTGAAGTTCTTTGTCACCCTTGGATTCAGGAAGATGGAGTTGCTCCAGACAAGCCTCTAGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTCAGGGTTATCGCAGATAATCTCTCCGAAGAAGAAATTTCCGGATTGAAAGAAATGTTCAAGATGATAGACACGGACAACAGTGGTCAAATTACTTTTGAAAAGCTCAAGGTTGGACTGAAGAAGTTTGGTGCTAATCTCAGCGAATCTGAAATTTACGATCTAATGCGTGCTGCAGATTTTGATAACAGCGGCACGATTGACTACGGAGAATTCATAGCTGCAACGTTGCATTTGAACAAAGTTGAGAGGGAAGATCACCTGATTGCAGCTTTCTCATATTTTGATACGGATGGAAGCGGTTACATCACTCAAGATGAGATTCAACAAGCTTGCGAAGAATTCGGCATGGACGATGATATCCGCTTGGAGGAAATTATCCGTGAAGCTGATCAAAATAATGATGGCCGAATAGACTACAATGAATTCGTGGCAATGATGCAGAGAGGCAATGCAGATTTAGGAAAGACCGATCTAAAAGCTAGCACTAGTTTTAACGTTGGAGGAGTTAGGGAGGCACTATCAGTGTGTTGA 1707 0.4458 MPQLRLFNKMPPQLVKIDNKDMKQVHQQSKQQVKEKEEQTMHMQKEQATPAPTTTTQREEARVSEPAKPKMIHSTRRLASAGLRTESVLLSNTGHLKEHYNLGPELGQGQYGTTFLCVEKGSGNKYACKSIAKVKLLTEEDVEDVRREIQIMHHLAGMSPNVVSIKGAHEDAVAVHAVMELCAGGELFDRILERGHYTERKAAKLARTIVSVVEACHSLGVMHRDLKPENFLFADGREDSTLKAIDFGMSVFFKPGEVFTDVVGSAYYIAPEVLLKHYGPEADVWSAGVIIYILLCGSPPFWGESEKEIFQEVLHGDLDFSSDPWPNISESAKDLVRKMLVRDPRKRITAAEVLCHPWIQEDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIADNLSEEEISGLKEMFKMIDTDNSGQITFEKLKVGLKKFGANLSESEIYDLMRAADFDNSGTIDYGEFIAATLHLNKVEREDHLIAAFSYFDTDGSGYITQDEIQQACEEFGMDDDIRLEEIIREADQNNDGRIDYNEFVAMMQRGNADLGKTDLKASTSFNVGGVREALSVC* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2982 568 SUPERFAMILY EF-hand 388 540 IPR011992 -
Dod01g2982 568 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Dod01g2982 568 Pfam EF-hand domain pair 419 469 IPR002048 GO:0005509
Dod01g2982 568 ProSiteProfiles EF-hand calcium-binding domain profile. 513 544 IPR002048 GO:0005509
Dod01g2982 568 Gene3D Phosphorylase Kinase; domain 1 103 186 - -
Dod01g2982 568 Gene3D - 369 543 - -
Dod01g2982 568 MobiDBLite consensus disorder prediction 1 78 - -
Dod01g2982 568 SMART serkin_6 100 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2982 568 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 549 - -
Dod01g2982 568 MobiDBLite consensus disorder prediction 44 60 - -
Dod01g2982 568 SUPERFAMILY Protein kinase-like (PK-like) 90 381 IPR011009 -
Dod01g2982 568 CDD STKc_CAMK 99 358 - -
Dod01g2982 568 ProSitePatterns EF-hand calcium-binding domain. 522 534 IPR018247 -
Dod01g2982 568 Pfam EF-hand domain pair 478 539 IPR002048 GO:0005509
Dod01g2982 568 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Dod01g2982 568 ProSitePatterns Protein kinases ATP-binding region signature. 106 133 IPR017441 GO:0005524
Dod01g2982 568 SMART efh_1 478 506 IPR002048 GO:0005509
Dod01g2982 568 SMART efh_1 513 541 IPR002048 GO:0005509
Dod01g2982 568 SMART efh_1 442 470 IPR002048 GO:0005509
Dod01g2982 568 SMART efh_1 406 434 IPR002048 GO:0005509
Dod01g2982 568 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Dod01g2982 568 Gene3D Transferase(Phosphotransferase) domain 1 187 368 - -
Dod01g2982 568 Coils Coil 19 46 - -
Dod01g2982 568 MobiDBLite consensus disorder prediction 19 43 - -
Dod01g2982 568 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 45 549 - -
Dod01g2982 568 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Dod01g2982 568 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Dod01g2982 568 Pfam Protein kinase domain 101 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2982 568 ProSiteProfiles Protein kinase domain profile. 100 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2982 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2982 Dod-Chr1 70457585 70460704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2982 23 558 EF-hand Containing Proteins AT3G10660 71.168 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod01g2982 Pkinase 2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2982 K13412 - gmx:100800415 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0340 07 4133487 4137525 Dod01g2982 01 70457585 70460704 PCT