Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2974 ATGAACAACACAACAGATTCATCTGGGTTGCTTGGCTCCAGCAACATCAGCGGCTCTGGCTATGGCATCGGAATTTCCATTGGGATTGTCCTTCTCATTATAACCATCGCTCTAGCTTCCTACTTCTGCACAAGAACACAAGTGTCAAGTGCTCCATCTGCTACTAGAAGACACACCCTCAATGTCCTTGAACCACAGCACTCAATTGTTGATGTTGGGCTAGATGAAGCAACCATTATGAGTTACCCAAAGCTGCTTTACTCAGAAGCCAAGCTGAAGAAGACCGATTCCACTGCAACATGTTGCTCCATATGTTTGGCAGATTACAAAGGTACTGATATGGTTCGGGTACTACCTGATTGTGGCCACCAATTCCACCTCAAGTGCGTAGACCCTTGGTTGAGACTGCATCCTACGTGTCCAGTGTGTAGAACATCTCCGATACCGACACCACTCTCAACACCTCTTGCTGGAGTGGTTCCATTAGCAAGCAGACAGGATTCGTAG 507 0.4714 MNNTTDSSGLLGSSNISGSGYGIGISIGIVLLIITIALASYFCTRTQVSSAPSATRRHTLNVLEPQHSIVDVGLDEATIMSYPKLLYSEAKLKKTDSTATCCSICLADYKGTDMVRVLPDCGHQFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAGVVPLASRQDS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2974 168 SMART ring_2 102 143 IPR001841 -
Dod01g2974 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 148 IPR013083 -
Dod01g2974 168 Pfam Ring finger domain 102 144 IPR001841 -
Dod01g2974 168 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Dod01g2974 168 PANTHER RING-H2 FINGER PROTEIN ATL70-LIKE 5 166 - -
Dod01g2974 168 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 166 IPR045899 -
Dod01g2974 168 CDD RING-H2_PA-TM-RING 101 144 - -
Dod01g2974 168 SUPERFAMILY RING/U-box 81 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2974 Dod-Chr1 70387777 70388348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2974 6 164 C3H Transcription Factor Family AT2G35910 61.728 2.53e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2974 - - gmx:100811799 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2974 01 70387777 70388348 Dod07g0328 07 4057794 4058804 PCT