Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2953 ATGGTTTCGTTAACGAGTTTGTGGCTTCATGGTAACCGGTTCACCGGGTCGATTCCGGGGAACATTGGGGACTTGGCTTCTTTGAAGAATCTTAACCTAAATGGCAACCAGCTTGTTGGCCTTGTACCTGATGCTTTAGGTAACATGGATTTGGACAATGTTGATTTGAACAATAACCGCTTGATGGGTCCGATCCCCAAGTTGAAAGCGGTTAATTTCACTTTTGCTAACAACGATTTTTGTGAAGACACTCCTGGGGTTCCATGCACCTTTGAGGTTATGGCGCTGTTGGAATTCCTTGGTGGGTTGAATTATCCTTCGATTCTGGCTGATTCGTGGACTGGGGATGACCCGTGTAAGGGTCCATGGTTGGGAATCAAGTGTAATAATGGGAAAGTGTCTATGATTAATTTGCCGAATTTTAAGCTTAATGGGACCCTCAGTCCTTCTGTTGCGAACTTGGGTTCTCTTGTTGAGATTAGGTTAGGGGGTAACAATATCAATGGTGTGGTGCCTAGAAATTGGACTAGCTTGGGTTCTCTGACATTGTTGGATCTGAGTGGCAATAACATTTCCCCTCCGATGCCTGAGTTTCACGCCGGATTGAAACTCATGATTGATGGGAATCCTTTGTTGAAAGGCGGCTCGCAAGCTCCTTCAAACAATACCCCATCATCTGGATCTGGAAGTGGTCAACCTTCTTCACCTGCAGGGTCTACACCTGCACAGTCAAATAACAATTCCAGTAGTTCTCATGAAACTAAGAAATCCAATAAGAAAGTGTTGGTTGCCATTGTGGCTCCCATTGCAGGCGTGGCAGCCGCGGCTTTTCTGCTCATTCCACTCTATGCATATTGTGTCCGGAGGAGGAGAAAGGATGCTTTGTCGGCTCCGAGTTTAGTGATACACCCTAAAGATCCATCTGATTCAGACAATGCGGTGAAGATTGTTGTTGCTAATAATACCAATGGAAGCATTTCCACTCTAACAGGGAGTGGGTCTGGGAGTAGAAACAGCAGCGGGATTGGGGAGTCTCACGTAATTGAAGCTGGAAATCTTGTGATATCGGTTCAAGTCCTGCGAAATGTGACCAAGAATTTTGCTCCTGAGAATGAGCTTGGCCGTGGTGGGTTTGGAGTGGTGTATAAGGGAGAATTGGATGATGGGACTAAAATTGCAGTGAAAAGGATGGAAGCCGGTGTGATTAGTAGCAAAGCCTTGGATGAATTTCAGGCTGAAATTGCAGTTCTATCGAAAGTCCGGCACCGGCATCTGGTGTCCCTTTTGGGTTATTCCATAGCAGGTAATGAGAGAATTCTAGTATACGAGTATATGCCCCAAGGTGCTCTCAGTAAGCATCTTTTCCATTGGAAAAGCTTAGGACTGGAGCCCCTCTCTTGGAAAAGGAGGCTCAATATTGCCCTGGATGTTGCTAGAGGAATGGAGTACCTTCATTCTCTGGCTCACCAGAGCTTCATTCACAGAGACCTCAAGTCGTCGAATATTTTGCTTGCCGATGACTATAGGGCAAAAGTCTCAGATTTTGGATTGGTAAAGCTTGCTCCTGAAGGCGAAAAATCTGTCGTGACCCGGCTTGCTGGGACTTTTGGATACTTGGCGCCAGAATATGCAGTGACAGGAAAAATCACTACCAAAGCAGATGTTTTCAGTTTTGGGGTTGTGCTAATGGAGCTGTTGACTGGATTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATACTTGGCAGCATGGTTCTGGCATATAAAATCAGATAAGAAGAAACTAATGGCTGCTATCGATCCATCCCTTGACATAAAAGAAGAAACATTTGAGACCGTCTCCACCATTGCTGAGTTGGCTGGGCACTGCACTGCCAGAGAACCAAACCAGCGGCCTGATATGGGTCATGCCGTGAATGTCCTGGCACCGCTAGTTGAAAAATGGAAACCATTTGATGACGACACCGAGGAGTACTCTGGCATCGATTATAGCCTTCCCCTTAACCAGATGGTGAAGGACTGGCAGGAGGCAGAAGGAAAGGACTTGAGTTATATGGACCTTGAAGACAGTAAAAGTAGTATCCCTGCAAGGCCTACTGGTTTTGCAGATTCTTTTACTTCAGCAGATGGCCGGTGA 2142 0.4613 MVSLTSLWLHGNRFTGSIPGNIGDLASLKNLNLNGNQLVGLVPDALGNMDLDNVDLNNNRLMGPIPKLKAVNFTFANNDFCEDTPGVPCTFEVMALLEFLGGLNYPSILADSWTGDDPCKGPWLGIKCNNGKVSMINLPNFKLNGTLSPSVANLGSLVEIRLGGNNINGVVPRNWTSLGSLTLLDLSGNNISPPMPEFHAGLKLMIDGNPLLKGGSQAPSNNTPSSGSGSGQPSSPAGSTPAQSNNNSSSSHETKKSNKKVLVAIVAPIAGVAAAAFLLIPLYAYCVRRRRKDALSAPSLVIHPKDPSDSDNAVKIVVANNTNGSISTLTGSGSGSRNSSGIGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISSKALDEFQAEIAVLSKVRHRHLVSLLGYSIAGNERILVYEYMPQGALSKHLFHWKSLGLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLADDYRAKVSDFGLVKLAPEGEKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLAAWFWHIKSDKKKLMAAIDPSLDIKEETFETVSTIAELAGHCTAREPNQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKDWQEAEGKDLSYMDLEDSKSSIPARPTGFADSFTSADGR* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2953 713 MobiDBLite consensus disorder prediction 213 256 - -
Dod01g2953 713 Gene3D Phosphorylase Kinase; domain 1 332 444 - -
Dod01g2953 713 SUPERFAMILY Protein kinase-like (PK-like) 343 643 IPR011009 -
Dod01g2953 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Dod01g2953 713 Gene3D Transferase(Phosphotransferase) domain 1 445 663 - -
Dod01g2953 713 CDD STKc_IRAK 373 646 - -
Dod01g2953 713 SMART LRR_typ_2 178 200 IPR003591 -
Dod01g2953 713 SMART LRR_typ_2 1 24 IPR003591 -
Dod01g2953 713 SMART LRR_typ_2 25 48 IPR003591 -
Dod01g2953 713 SMART LRR_typ_2 154 177 IPR003591 -
Dod01g2953 713 MobiDBLite consensus disorder prediction 214 252 - -
Dod01g2953 713 ProSiteProfiles Protein kinase domain profile. 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2953 713 Gene3D Ribonuclease Inhibitor 1 90 IPR032675 -
Dod01g2953 713 MobiDBLite consensus disorder prediction 691 713 - -
Dod01g2953 713 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 1 713 - -
Dod01g2953 713 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Dod01g2953 713 SUPERFAMILY L domain-like 3 211 - -
Dod01g2953 713 SMART serkin_6 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2953 713 Pfam Leucine rich repeat N-terminal domain 94 129 IPR013210 -
Dod01g2953 713 PANTHER OSJNBA0070M12.3 PROTEIN 1 713 - -
Dod01g2953 713 Pfam Protein tyrosine and serine/threonine kinase 370 641 IPR001245 GO:0004672|GO:0006468
Dod01g2953 713 Gene3D Ribonuclease Inhibitor 91 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2953 Dod-Chr1 70071263 70073983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2953 224 643 Trihelix Transcription Factor Family AT1G70460 36.585 7.58e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dod01g2953 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2953 - - gmx:100305366 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2953 01 70071263 70073983 Dod07g0302 07 3750706 3753190 PCT