Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2940 ATGGCTGATAAGCAACCACACTTGAACGGTGCCTACTACGGCCCCGCCATTCCACCGGCGGAGCCACCCCGCCGCTACCGCCACCACCACAGCAGAGGCTGCTTATGGTGCCTTTTCAGCATCTTCTGGAAGATCGTCGTCACACTCATCTTCCTCGCTGTCATCGCAGGCGTCATATTCTGGCTCGTAGTTCAGCCCCGCATGTTCAAGTTCTACGTGACCGAAGCCGACCTAACACAATTCGAATACAACAACAACAACACGCTCAGCTACAACATGGTGCTCAACTTCACTGCCCGCAACCCGAACAAGAAGCTCAGCATCTACTACGACAAAGTGGAGGCCAATGCATTCTACGAGGACACGTGGTTCGACACCACCGACGTGATCACTCACATGAACTCCTTCCGACAGTACAAGAAGAGCACGAGCCCCATGAGCGGCGTTTTCTCCGGGCAGCAAGCGATGCATTTCGACAATGACCAGGTCGCTAAGTTCAATGAAGATAAGAGTGCTGGGGCTTTTGACATCTATGTGAAGCTCTACTTCAGGATCAGGTTCAGGCTTGGTGACGTGATTACGGGTACCCGCAAGCCTAAGGTTAAGTGCCACATCAGAGTTCCCTTGAATTCAAACACAACCAGGACGTTCTTTGAGTCCAAAAAGTGCGATGTTGATTTATAG 684 0.5175 MADKQPHLNGAYYGPAIPPAEPPRRYRHHHSRGCLWCLFSIFWKIVVTLIFLAVIAGVIFWLVVQPRMFKFYVTEADLTQFEYNNNNTLSYNMVLNFTARNPNKKLSIYYDKVEANAFYEDTWFDTTDVITHMNSFRQYKKSTSPMSGVFSGQQAMHFDNDQVAKFNEDKSAGAFDIYVKLYFRIRFRLGDVITGTRKPKVKCHIRVPLNSNTTRTFFESKKCDVDL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2940 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 225 - -
Dod01g2940 227 PANTHER OS05G0367900 PROTEIN 22 225 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2940 Dod-Chr1 69906833 69908028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2940 63 214 SNARE and Associated Proteins AT1G32270 31.613 4.39e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2940 - - gmx:100807701 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2940 01 69906833 69908028 Dod07g0296 07 3667836 3669665 PCT